Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 AL355796.1-201ENST00000406706 323 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 RNU2-54P-201ENST00000410299 190 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 AC073910.1-201ENST00000445047 438 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 RNU2-12P-201ENST00000517216 168 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.96□□□□□ -2.1
BEST2Q8NFU1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.96□□□□□ -2.1
BEST2Q8NFU1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
BEST2Q8NFU1 AC011373.1-201ENST00000607270 237 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 MIR338-201ENST00000636369 67 ntBASIC1.96□□□□□ -2.1
BEST2Q8NFU1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RNU6-806P-201ENST00000365147 105 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 SNORA20B-201ENST00000384220 132 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AL117342.1-201ENST00000404861 406 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 RNVU1-2-201ENST00000516326 135 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 MIR4300-201ENST00000581016 96 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AC022441.3-201ENST00000605737 136 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AL353149.1-201ENST00000610667 244 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
BEST2Q8NFU1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
BEST2Q8NFU1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNU6-770P-201ENST00000363929 105 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNU6-324P-201ENST00000363957 106 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 SNORD63-201ENST00000384262 68 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNU6-21P-201ENST00000384710 107 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RPL21P1-201ENST00000399532 476 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 RNU6-121P-201ENST00000410525 99 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AC096920.1-201ENST00000423991 241 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 MTND5P22-201ENST00000458380 195 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AC010598.1-201ENST00000510378 103 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AC023157.2-201ENST00000540596 141 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 MIR5094-201ENST00000578766 85 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AC008749.1-201ENST00000597650 306 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.94□□□□□ -2.1
BEST2Q8NFU1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.93□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 SNORD113-8-201ENST00000363497 74 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 SNORA33-201ENST00000363664 130 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 SNORD115-30-201ENST00000364117 82 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RNU6-407P-201ENST00000365280 104 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 SNORD115-46-201ENST00000390982 71 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RNA5SP467-201ENST00000391274 118 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RPL23AP36-201ENST00000413895 458 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 AL390729.2-201ENST00000416137 156 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 AC005042.3-201ENST00000453230 174 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RPS27P22-201ENST00000478056 241 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RNU6-635P-201ENST00000516651 102 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 MIR3684-201ENST00000579779 74 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 AC136443.5-201ENST00000603741 370 ntBASIC1.93□□□□□ -2.1
BEST2Q8NFU1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
BEST2Q8NFU1 CST2P1-201ENST00000425770 87 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
BEST2Q8NFU1 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 LINC01399-202ENST00000458450 244 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.92□□□□□ -2.1
BEST2Q8NFU1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
BEST2Q8NFU1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
BEST2Q8NFU1 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 SNORA27.1-201ENST00000362604 124 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 RNU6-238P-201ENST00000363313 106 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 RPL21P38-201ENST00000418090 167 ntBASIC1.91□□□□□ -2.1
BEST2Q8NFU1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.91□□□□□ -2.1
BEST2Q8NFU1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms