Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AC091021.1-201ENST00000468051 388 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 MTND3P22-201ENST00000510932 243 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 MIR4672-201ENST00000583126 81 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 AC004467.1-201ENST00000615678 330 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 MIR4272-201ENST00000635924 64 ntBASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 RNY3P1-201ENST00000365085 102 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 RNY3-201ENST00000365484 102 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 RNU6-708P-201ENST00000384217 107 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 MIR628-201ENST00000385229 95 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 RNU11-5P-201ENST00000391216 129 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 RNU6-341P-201ENST00000516973 96 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 AP001094.1-201ENST00000579805 193 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 MIR4648-201ENST00000580107 72 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 VN1R91P-201ENST00000594377 169 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 LARP7P1-201ENST00000605576 316 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 AC040896.1-201ENST00000613819 479 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 AL513423.1-201ENST00000621695 132 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 MIR6852-201ENST00000621699 66 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 U6.92-201ENST00000636464 89 ntBASIC1.3□□□□□ -2.2
CCDC197Q8NCU1 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AL034345.1-201ENST00000407768 123 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AC236972.2-201ENST00000434979 310 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 MTATP6P23-201ENST00000440153 476 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 PGBD4P5-201ENST00000445958 426 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 UBE2DNL-203ENST00000474922 222 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 SNORD116.3-201ENST00000517176 78 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 RPL21P9-201ENST00000556149 474 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AC006600.1-201ENST00000572529 153 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 MIR3937-201ENST00000580135 106 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AL162424.1-201ENST00000602325 221 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.804-201ENST00000615262 101 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AC240442.1-201ENST00000616055 283 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 AC104985.2-201ENST00000620598 500 ntBASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC197Q8NCU1 ZNF72P-201ENST00000425869 1908 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 Y_RNA.111-201ENST00000363248 100 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 RNU4-13P-201ENST00000364019 141 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 RNU6-376P-201ENST00000384731 106 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 STAG3L5P-204ENST00000443759 179 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 SUMO2P16-201ENST00000519475 264 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 MIR4659A-201ENST00000580269 81 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AC005176.2-201ENST00000596933 147 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AL021879.1-201ENST00000611756 288 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AC011476.5-201ENST00000615594 130 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AL121890.5-201ENST00000620848 304 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AC127459.3-201ENST00000624328 466 ntBASIC1.28□□□□□ -2.2
CCDC197Q8NCU1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.28□□□□□ -2.21
CCDC197Q8NCU1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 RNU4-79P-201ENST00000362764 141 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 RNU4-73P-201ENST00000363164 141 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 RNU6-20P-201ENST00000384106 107 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 MIR562-201ENST00000384894 95 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 RNU2-54P-201ENST00000410299 190 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 AC015720.1-201ENST00000565251 277 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 MIR4795-201ENST00000584182 89 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 AC073349.3-201ENST00000617616 186 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.27□□□□□ -2.21
CCDC197Q8NCU1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 SNORA1B-201ENST00000362535 133 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 MIR660-201ENST00000385235 97 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 AL031003.1-201ENST00000404229 172 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 HSPE1P13-201ENST00000451143 297 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RPS29P21-201ENST00000496272 170 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 OR9P1P-201ENST00000496431 281 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RNU6-976P-201ENST00000516086 111 ntBASIC1.26□□□□□ -2.21
CCDC197Q8NCU1 RNU6-966P-201ENST00000516479 104 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms