Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 RNU1-131P-201ENST00000458943 161 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 RPL36AP21-201ENST00000490372 323 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 PDCD5P2-201ENST00000507570 312 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 MIR2276-201ENST00000516886 89 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 AP001328.1-201ENST00000528550 176 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 MIR3126-201ENST00000577443 74 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 AC006023.1-201ENST00000603944 259 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPAS4Q8IUM7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 RNU6-728P-201ENST00000365375 104 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC016909.1-201ENST00000415916 166 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 HMGN2P34-201ENST00000437647 269 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC117454.1-201ENST00000491120 168 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 RNU7-116P-201ENST00000516940 62 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 MIR3646-201ENST00000578301 84 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 MIR4438-201ENST00000585271 93 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AL031274.2-201ENST00000599419 203 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AP001340.1-201ENST00000624405 217 ntBASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS4Q8IUM7 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 MIR367-201ENST00000362299 68 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RNU4-13P-201ENST00000364019 141 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RNU1-91P-201ENST00000364746 163 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.563-201ENST00000384707 108 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 MIR29C-201ENST00000385231 88 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RNA5SP492-201ENST00000411330 114 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RHEBP3-201ENST00000411920 351 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 AL353689.1-201ENST00000438895 199 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RN7SL636P-201ENST00000497504 294 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 MIR5688-201ENST00000580619 83 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 MIR4672-201ENST00000583126 81 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 RPL12P50-201ENST00000603116 116 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 MIR6129-201ENST00000616087 109 ntBASIC3.36□□□□□ -1.87
NPAS4Q8IUM7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.251-201ENST00000364551 99 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 RNU6-144P-201ENST00000383951 107 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 MIR181A2-201ENST00000384863 110 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 RNY4P18-201ENST00000391107 89 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 AC022018.1-201ENST00000430685 241 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 YWHAEP4-201ENST00000505390 198 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 AC011406.1-201ENST00000512440 370 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 AC068647.2-201ENST00000637380 353 ntBASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS4Q8IUM7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 MIR22-201ENST00000362190 85 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.294-201ENST00000364916 102 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.393-201ENST00000383936 102 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 RNU6-443P-201ENST00000384780 107 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 MIR515-2-201ENST00000384883 83 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 MIR515-1-201ENST00000384884 83 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 AL512604.1-201ENST00000404812 257 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 AL031121.1-201ENST00000406553 254 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 RNU6-1064P-201ENST00000410626 104 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 Y_RNA.622-201ENST00000411091 108 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 AL139132.1-201ENST00000431587 344 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 RPS27P1-201ENST00000450552 247 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 RNA5SP76-201ENST00000516277 87 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 AC005972.2-201ENST00000604690 348 ntBASIC3.34□□□□□ -1.87
NPAS4Q8IUM7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1082P-201ENST00000364574 107 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 RNU6-915P-201ENST00000364943 103 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 SNORA36B-201ENST00000410438 131 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 RPS15AP28-201ENST00000435088 386 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 AC097462.1-201ENST00000514125 324 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 RNU7-172P-201ENST00000517125 64 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 CYCSP26-201ENST00000534107 320 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 AC007229.1-201ENST00000590455 412 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 U7.2-201ENST00000607576 63 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms