Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 AC091021.1-201ENST00000468051 388 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 COX6CP14-201ENST00000469580 174 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNA5SP20-201ENST00000515976 84 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 MTND4LP26-201ENST00000518144 282 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 AC105029.1-201ENST00000520250 669 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 AP002001.1-203ENST00000534002 267 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 AC004584.2-201ENST00000570407 410 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS36Q86VN1 MIR6079-201ENST00000635807 62 ntBASIC1.17□□□□□ -2.22
VPS36Q86VN1 RNU1-22P-201ENST00000363334 158 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 RNU6-767P-201ENST00000384132 107 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 RNU6-376P-201ENST00000384731 106 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC018865.2-201ENST00000423631 129 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 CALM2P4-201ENST00000430810 426 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC233266.1-201ENST00000454518 96 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC097462.1-201ENST00000514125 324 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 RPL21P9-201ENST00000556149 474 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC242852.1-201ENST00000612151 96 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC073349.3-201ENST00000617616 186 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC244015.1-201ENST00000622301 99 ntBASIC1.16□□□□□ -2.22
VPS36Q86VN1 AC005592.1-201ENST00000566527 1640 ntBASIC1.15□□□□□ -2.22
VPS36Q86VN1 RNU6-593P-201ENST00000364716 112 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNU6-926P-201ENST00000384075 107 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNA5SP475-201ENST00000410568 110 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS36Q86VN1 MIR2053-201ENST00000459295 91 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 RNU6-63P-201ENST00000516690 95 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS36Q86VN1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.15□□□□□ -2.23
VPS36Q86VN1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS36Q86VN1 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 AC068137.4-201ENST00000638485 296 ntBASIC1.15□□□□□ -2.23
VPS36Q86VN1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS36Q86VN1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNU6-454P-201ENST00000364292 107 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNU6-505P-201ENST00000384427 107 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 AC114482.1-201ENST00000418010 247 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS36Q86VN1 HSPE1P13-201ENST00000451143 297 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNU7-94P-201ENST00000459576 63 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RPL17P19-201ENST00000489069 552 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 RNU2-56P-201ENST00000516826 190 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS36Q86VN1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS36Q86VN1 AC098679.4-201ENST00000624241 654 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 AC099654.5-201ENST00000636479 350 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 AL669831.3-213ENST00000636676 183 ntBASIC1.14□□□□□ -2.23
VPS36Q86VN1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 RNY3P11-201ENST00000364153 102 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 RNU4-76P-201ENST00000364509 141 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 MTCYBP4-201ENST00000401524 249 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS36Q86VN1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS36Q86VN1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 SNORA40.9-201ENST00000515895 93 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS36Q86VN1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
VPS36Q86VN1 U6.115-201ENST00000636045 103 ntBASIC1.13□□□□□ -2.23
VPS36Q86VN1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VPS36Q86VN1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS36Q86VN1 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 RNU6-845P-201ENST00000362578 103 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 SNORA27.1-201ENST00000362604 124 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 MIR660-201ENST00000385235 97 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 SNORD12B-201ENST00000410433 91 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 RNU6-370P-201ENST00000411008 104 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 MTCO3P19-201ENST00000415864 321 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 RAB28P5-201ENST00000427490 651 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 RNU7-169P-201ENST00000459456 61 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS36Q86VN1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS36Q86VN1 RNU6-408P-201ENST00000515910 100 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS36Q86VN1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS36Q86VN1 AC006435.5-201ENST00000624486 112 ntBASIC1.12□□□□□ -2.23
VPS36Q86VN1 MIR3674-201ENST00000636576 68 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms