Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LDB1Q86U70 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LDB1Q86U70 MTND4P29-201ENST00000503122 1372 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 RPL21P1-201ENST00000399532 476 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR1302-11-201ENST00000408051 138 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR1302-9-201ENST00000408365 138 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR1302-10-201ENST00000408734 138 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 RNU2-54P-201ENST00000410299 190 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MCFD2P1-201ENST00000417812 300 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.65□□□□□ -2.15
LDB1Q86U70 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AL606517.2-201ENST00000442855 241 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 RPS27P1-201ENST00000450552 247 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.65□□□□□ -2.15
LDB1Q86U70 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
LDB1Q86U70 RN7SKP295-201ENST00000517264 153 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
LDB1Q86U70 RPL21P9-201ENST00000556149 474 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR4709-201ENST00000577272 72 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AC022217.4-201ENST00000604389 163 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 AL121655.1-201ENST00000605811 308 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 Y_RNA.772-201ENST00000606692 102 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 MIR1302-2-201ENST00000607096 138 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.15
LDB1Q86U70 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
LDB1Q86U70 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.65□□□□□ -2.15
LDB1Q86U70 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LDB1Q86U70 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LDB1Q86U70 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LDB1Q86U70 Y_RNA.101-201ENST00000363154 102 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 SNORD115-30-201ENST00000364117 82 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 MTND4P19-201ENST00000446659 478 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 AC108210.2-201ENST00000503681 201 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.64□□□□□ -2.15
LDB1Q86U70 MIR4524B-201ENST00000581569 115 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 MIR3124-201ENST00000582636 67 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 AC073413.2-201ENST00000604332 360 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 AC005592.1-201ENST00000566527 1640 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 AC018630.2-201ENST00000534866 2403 ntBASIC1.64□□□□□ -2.15
LDB1Q86U70 MIR424-201ENST00000362227 98 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 SNORD14.1-201ENST00000365609 90 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 Y_RNA.458-201ENST00000384240 102 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 MRPL42P3-201ENST00000401492 326 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 PMCHL1-202ENST00000423102 261 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 AC245047.3-201ENST00000429428 127 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 HSPE1P21-201ENST00000438283 308 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 Y_RNA.631-201ENST00000459607 101 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 RPS26P55-201ENST00000471178 356 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.63□□□□□ -2.15
LDB1Q86U70 SNORA25.10-201ENST00000515926 124 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 RNU6-1278P-201ENST00000516130 107 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.63□□□□□ -2.15
LDB1Q86U70 AC015712.3-201ENST00000559380 164 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 AL390123.1-201ENST00000603216 237 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 AC091812.1-201ENST00000432235 1948 ntBASIC1.63□□□□□ -2.15
LDB1Q86U70 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.63□□□□□ -2.15
LDB1Q86U70 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LDB1Q86U70 Y_RNA.31-201ENST00000362574 102 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 Y_RNA.128-201ENST00000363391 112 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 RNU4-50P-201ENST00000364361 141 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 Y_RNA.361-201ENST00000365515 120 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 Y_RNA.424-201ENST00000384063 103 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 RNU6-308P-201ENST00000390957 107 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 MTND1P14-201ENST00000427400 950 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 Y_RNA.713-201ENST00000517013 96 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 AC040926.1-201ENST00000530195 238 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 AC022441.3-201ENST00000605737 136 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 MIR8054-201ENST00000620877 86 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 AC127459.3-201ENST00000624328 466 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.62□□□□□ -2.15
LDB1Q86U70 AC134503.1-201ENST00000633048 54 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 AC100821.1-201ENST00000523153 2479 ntBASIC1.62□□□□□ -2.15
LDB1Q86U70 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LDB1Q86U70 Y_RNA.124-201ENST00000363339 93 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 Y_RNA.446-201ENST00000384178 104 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RNU6-474P-201ENST00000384243 107 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 Y_RNA.462-201ENST00000384268 102 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RNU6-376P-201ENST00000384731 106 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 MIR562-201ENST00000384894 95 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RN7SKP200-201ENST00000410564 320 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RN7SKP101-201ENST00000411376 320 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 AL390729.2-201ENST00000416137 156 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 U8.20-201ENST00000459445 131 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 AL163540.1-201ENST00000485382 386 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 RNU6-155P-201ENST00000516347 100 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.61□□□□□ -2.15
LDB1Q86U70 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
LDB1Q86U70 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms