Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 Y_RNA.473-201ENST00000384333 102 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MTCYBP10-201ENST00000424905 650 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 AC018638.8-201ENST00000588755 281 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 AC104260.1-201ENST00000616660 539 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
TRIM40Q6P9F5 MIR410-201ENST00000362222 80 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 Y_RNA.2-201ENST00000362330 96 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-874P-201ENST00000362390 105 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 SNORA1B-201ENST00000362535 133 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNA5SP361-201ENST00000362686 118 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-1215P-201ENST00000384441 102 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-376P-201ENST00000384731 106 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 SNORD116-4-201ENST00000384733 96 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-510P-201ENST00000391239 108 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AL451046.2-201ENST00000403074 277 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 Y_RNA.594-201ENST00000410373 140 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AC074085.1-201ENST00000413598 418 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 UBE2V1P7-201ENST00000446395 340 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU7-87P-201ENST00000459343 62 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AC092989.1-201ENST00000481235 277 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-322P-201ENST00000516010 103 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AP002004.2-201ENST00000531656 154 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 AC018448.1-201ENST00000552843 316 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 MIR4452-201ENST00000583004 71 ntBASIC0.86□□□□□ -2.27
TRIM40Q6P9F5 RNY1P16-201ENST00000363063 111 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 SNORA2.2-201ENST00000365473 135 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 Y_RNA.557-201ENST00000384680 107 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 MIR548K-201ENST00000408406 116 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 MIR548F5-201ENST00000408421 86 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RNU6-1050P-201ENST00000410388 107 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RPS3AP52-201ENST00000435639 297 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 AL137792.2-201ENST00000443484 235 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 Y_RNA.670-201ENST00000516255 105 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 AC080078.2-201ENST00000603766 501 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 AC012676.2-201ENST00000619258 186 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 AC005592.1-201ENST00000566527 1640 ntBASIC0.85□□□□□ -2.27
TRIM40Q6P9F5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 Y_RNA.498-201ENST00000384460 102 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 MIR1277-201ENST00000408536 78 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 MIR548F1-201ENST00000408667 84 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AL353997.1-201ENST00000432936 108 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AC093850.1-201ENST00000454121 251 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 RNU7-12P-201ENST00000516030 62 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AL357312.1-201ENST00000603879 298 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 AC005828.6-201ENST00000606610 232 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 U6.115-201ENST00000636045 103 ntBASIC0.84□□□□□ -2.27
TRIM40Q6P9F5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
TRIM40Q6P9F5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.86-201ENST00000363020 111 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 MIR873-201ENST00000401120 77 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 U8.22-201ENST00000459141 133 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 RNU6-718P-201ENST00000516166 105 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 RNU6-1291P-201ENST00000516591 104 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.708-201ENST00000516950 96 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AP002001.1-203ENST00000534002 267 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC093783.1-201ENST00000612976 329 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC127459.3-201ENST00000624328 466 ntBASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRIM40Q6P9F5 AC027514.1-201ENST00000588561 1603 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms