Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
SNX30Q5VWJ9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SNX30Q5VWJ9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
SNX30Q5VWJ9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNX30Q5VWJ9 Y_RNA.243-201ENST00000364481 109 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 Y_RNA.526-201ENST00000384572 110 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 SDAD1P3-201ENST00000427380 333 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AP002001.1-203ENST00000534002 267 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 RAB11AP2-201ENST00000545905 639 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AC005176.2-201ENST00000596933 147 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AL117336.2-201ENST00000602435 335 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 AC022217.4-201ENST00000604389 163 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 SNORA28-201ENST00000606769 126 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 MIR8063-201ENST00000621930 81 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 MIR4272-201ENST00000635924 64 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 WWP1P1-201ENST00000466609 2769 ntBASIC1.72□□□□□ -2.13
SNX30Q5VWJ9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.13
SNX30Q5VWJ9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 RNU6-454P-201ENST00000364292 107 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.230-201ENST00000364348 109 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 AL034345.1-201ENST00000407768 123 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 MIR4659A-201ENST00000580269 81 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 RPS29P30-201ENST00000600975 111 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 AC004467.1-201ENST00000615678 330 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 MIR8054-201ENST00000620877 86 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 AC091925.1-201ENST00000623204 462 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 MIR6079-201ENST00000635807 62 ntBASIC1.71□□□□□ -2.14
SNX30Q5VWJ9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU6-961P-201ENST00000363893 105 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU6-376P-201ENST00000384731 106 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU6-440P-201ENST00000390882 105 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU1-78P-201ENST00000391248 165 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AC108667.1-201ENST00000428618 249 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AC096644.2-201ENST00000429278 159 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AL137792.2-201ENST00000443484 235 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 CHEK2P4-201ENST00000450340 246 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RPS26P55-201ENST00000471178 356 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 SNORA40.14-201ENST00000516543 86 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 RNU2-12P-201ENST00000517216 168 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AC092447.9-201ENST00000603395 144 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AL133255.1-201ENST00000606374 441 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SNX30Q5VWJ9 MIR126-201ENST00000362291 85 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.197-201ENST00000364004 102 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.496-201ENST00000384444 101 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AL606517.2-201ENST00000442855 241 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AL163540.1-201ENST00000485382 386 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 AC127459.3-201ENST00000624328 466 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 U6.92-201ENST00000636464 89 ntBASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SNX30Q5VWJ9 RNU6-203P-201ENST00000384038 104 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 MIR520G-201ENST00000385064 90 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.579-201ENST00000390939 94 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 RNU2-54P-201ENST00000410299 190 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 PGBD4P5-201ENST00000445958 426 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.713-201ENST00000517013 96 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 Y_RNA.772-201ENST00000606692 102 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 AC240442.1-201ENST00000616055 283 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 AL606534.2-204ENST00000635008 178 ntBASIC1.68□□□□□ -2.14
SNX30Q5VWJ9 RNU6-626P-201ENST00000363354 107 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNU6-20P-201ENST00000384106 107 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 AL390729.2-201ENST00000416137 156 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 AL160004.2-201ENST00000432935 350 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 SNORA31.10-201ENST00000516482 106 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNU2-56P-201ENST00000516826 190 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 RNU6-341P-201ENST00000516973 96 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 AC104985.2-201ENST00000620598 500 ntBASIC1.67□□□□□ -2.14
SNX30Q5VWJ9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms