Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR1253-201ENST00000408273 105 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 MIR1263-201ENST00000408324 86 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 SNORA11-201ENST00000408789 128 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 RNU2-34P-201ENST00000516534 121 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 SNORD59.2-201ENST00000516873 68 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 RNU6-1096P-201ENST00000517089 102 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 MIR4662B-201ENST00000579498 81 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 GABRG2-229ENST00000641017 3628 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF20Q5VTR2 Y_RNA.66-201ENST00000362862 102 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 SNORA1-201ENST00000384107 130 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 RNU1-101P-201ENST00000391171 127 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 RNU2-32P-201ENST00000411193 191 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 IGKV1-22-201ENST00000524313 326 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 uc_338.28-201ENST00000612082 187 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF20Q5VTR2 AC093908.1-201ENST00000623125 8092 ntBASIC3.8□□□□□ -1.8
RNF20Q5VTR2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF20Q5VTR2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF20Q5VTR2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF20Q5VTR2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF20Q5VTR2 CD24P4-201ENST00000382840 243 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 RNU6-546P-201ENST00000383991 107 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 MTATP6P21-201ENST00000440681 189 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 MTCO1P44-201ENST00000441935 243 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 AL031737.1-201ENST00000450125 223 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 AL021397.1-201ENST00000451806 248 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF20Q5VTR2 MIR5582-201ENST00000579697 68 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF20Q5VTR2 AL365205.2-201ENST00000594586 68 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 U6.73-201ENST00000619194 103 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
RNF20Q5VTR2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF20Q5VTR2 Y_RNA.116-201ENST00000363292 103 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 MIR7-3-201ENST00000384898 110 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 RNU6-1186P-201ENST00000410429 97 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AF228730.3-201ENST00000436691 102 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC233266.1-201ENST00000454518 96 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 NDUFA4P2-201ENST00000489989 244 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 MIR3199-1-201ENST00000582434 88 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC073413.2-201ENST00000604332 360 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC242852.1-201ENST00000612151 96 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC244015.1-201ENST00000622301 99 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 MIR7515-201ENST00000637837 67 ntBASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF20Q5VTR2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
RNF20Q5VTR2 AC008264.2-201ENST00000610193 3731 ntBASIC3.78□□□□□ -1.81
RNF20Q5VTR2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 SNORA12.1-201ENST00000390873 148 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 HMGN2P34-201ENST00000437647 269 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 SNORA4.4-201ENST00000515921 135 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 RNU6-504P-201ENST00000516568 104 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 RNU6-126P-201ENST00000516685 103 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 RNU6-1270P-201ENST00000517128 108 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.77□□□□□ -1.81
RNF20Q5VTR2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF20Q5VTR2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF20Q5VTR2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU6-32P-201ENST00000383948 107 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU6-13P-201ENST00000384248 107 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU6-12P-201ENST00000384604 107 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU6-41P-201ENST00000384741 107 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RN7SKP27-201ENST00000410684 333 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU4-47P-201ENST00000410876 114 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 AC091153.1-201ENST00000466297 402 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF20Q5VTR2 MRPS17P9-201ENST00000511924 393 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 RNU6-991P-201ENST00000516168 107 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF20Q5VTR2 MIR4429-201ENST00000580105 73 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 U2.20-201ENST00000613956 192 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF20Q5VTR2 AC080128.1-201ENST00000474389 1917 ntBASIC3.76□□□□□ -1.81
RNF20Q5VTR2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
RNF20Q5VTR2 RNA5SP139-201ENST00000364340 117 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 RPL21P3-201ENST00000395517 478 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 AC244505.4-201ENST00000434905 287 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 SSXP5-201ENST00000443473 287 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 AP001486.1-201ENST00000463339 476 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 Y_RNA.694-201ENST00000516677 117 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 RNU6-537P-201ENST00000517277 103 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 MIR4506-201ENST00000584693 77 ntBASIC3.75□□□□□ -1.81
RNF20Q5VTR2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms