Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 Pinc.1-201ENST00000616452 154 ntBASIC3.42□□□□□ -1.86
TTC39BQ5VTQ0 MIR7157-201ENST00000635801 60 ntBASIC3.42□□□□□ -1.86
TTC39BQ5VTQ0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TTC39BQ5VTQ0 AC080128.1-201ENST00000474389 1917 ntBASIC3.42□□□□□ -1.86
TTC39BQ5VTQ0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TTC39BQ5VTQ0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 RNU6-508P-201ENST00000363231 103 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 RNU1-23P-201ENST00000363361 144 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 SNORD56.3-201ENST00000363507 71 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 RPL39P40-201ENST00000445481 146 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 AP001486.1-201ENST00000463339 476 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 RNU6-589P-201ENST00000516485 107 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 RNU7-149P-201ENST00000516739 59 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 AC108081.1-201ENST00000604358 221 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 AL449363.1-201ENST00000617815 186 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 U6.73-201ENST00000619194 103 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 MIR5739-201ENST00000619803 80 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39BQ5VTQ0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
TTC39BQ5VTQ0 MIR340-201ENST00000362125 95 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 AC123900.1-201ENST00000420390 96 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 AL161788.1-201ENST00000441805 169 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 U6.95-201ENST00000636931 70 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 AC073346.2-201ENST00000624724 2058 ntBASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39BQ5VTQ0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-309P-201ENST00000364573 106 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AL603914.1-201ENST00000401964 204 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AC060773.1-201ENST00000421698 310 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 RPS29P21-201ENST00000496272 170 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 OR9P1P-201ENST00000496431 281 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 CYCTP-201ENST00000504253 315 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 SNORA4.4-201ENST00000515921 135 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-991P-201ENST00000516168 107 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-856P-201ENST00000516959 98 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AC133485.4-201ENST00000561835 220 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 AC138907.4-201ENST00000570107 226 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.39□□□□□ -1.87
TTC39BQ5VTQ0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 SNORD18B-201ENST00000365659 72 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 SNORA22-201ENST00000383907 134 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 MIR483-201ENST00000385070 76 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 MIR95-201ENST00000385072 81 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 MIR1253-201ENST00000408273 105 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNU2-48P-201ENST00000410694 191 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNU4-47P-201ENST00000410876 114 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNA5SP492-201ENST00000411330 114 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 AC092427.1-202ENST00000430569 476 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 SNORD33.1-201ENST00000516213 88 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-1061P-201ENST00000516530 99 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 AC068657.1-201ENST00000520807 306 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 MIR5680-201ENST00000577577 84 ntBASIC3.38□□□□□ -1.87
TTC39BQ5VTQ0 MTND5P32-201ENST00000560711 1802 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 SNORA38.1-201ENST00000364172 131 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 SNORA26-201ENST00000391286 122 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 RNU5E-3P-201ENST00000515913 68 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 SNORA70.24-201ENST00000517233 118 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 MIR5195-201ENST00000583555 115 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 MIR7112-201ENST00000616126 65 ntBASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TTC39BQ5VTQ0 AL136360.1-201ENST00000503377 1900 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 RNU1-70P-201ENST00000362618 164 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-755P-201ENST00000364400 103 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 MIR491-201ENST00000384877 84 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 MIR4662B-201ENST00000579498 81 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms