Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.23□□□□□ -2.05
RNF220Q5VTB9 OOSP1P1-201ENST00000423265 274 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 RNA5SP57-201ENST00000459463 123 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 RNU7-94P-201ENST00000459576 63 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.23□□□□□ -2.05
RNF220Q5VTB9 AL161670.1-201ENST00000554348 137 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF220Q5VTB9 AC073413.2-201ENST00000604332 360 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RNF220Q5VTB9 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 RNA5SP138-201ENST00000365098 114 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 MIR196B-201ENST00000384852 84 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 MIR568-201ENST00000385036 95 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 RNU6-1338P-201ENST00000516328 91 ntBASIC2.22□□□□□ -2.05
RNF220Q5VTB9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF220Q5VTB9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.22□□□□□ -2.05
RNF220Q5VTB9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU4-80P-201ENST00000363200 141 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 SNORA63D-201ENST00000364359 132 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 SNORD114-30-201ENST00000364448 72 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.418-201ENST00000384029 102 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU6-514P-201ENST00000384208 107 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.456-201ENST00000384232 111 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.556-201ENST00000384677 113 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU6-855P-201ENST00000410395 104 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU2-7P-201ENST00000410794 178 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 TRBV12-1-201ENST00000479785 344 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 RNU6-63P-201ENST00000516690 95 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
RNF220Q5VTB9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF220Q5VTB9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF220Q5VTB9 SNORA25.1-201ENST00000362326 128 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.16-201ENST00000362421 102 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.341-201ENST00000365341 102 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.368-201ENST00000365547 113 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF220Q5VTB9 RNU6-296P-201ENST00000384608 107 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 MT-TW-201ENST00000387382 68 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 MTCO1P5-201ENST00000433573 344 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF220Q5VTB9 RPL36AP21-201ENST00000490372 323 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF220Q5VTB9 SERF1AP1-201ENST00000514575 187 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 RNU6-191P-201ENST00000516295 94 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF220Q5VTB9 AC010900.2-201ENST00000604508 210 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 AC018630.2-201ENST00000534866 2403 ntBASIC2.2□□□□□ -2.06
RNF220Q5VTB9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AL391987.6-201ENST00000305671 199 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 RNA5SP68-201ENST00000363885 119 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 RNU6-196P-201ENST00000384315 107 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.483-201ENST00000384380 101 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 RNU6-136P-201ENST00000384663 107 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 MIR562-201ENST00000384894 95 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AC009310.1-201ENST00000414414 451 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AC108938.1-201ENST00000451204 136 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 DEFB108E-201ENST00000524692 240 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 AL512605.2-201ENST00000592972 256 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 MIR6079-201ENST00000635807 62 ntBASIC2.19□□□□□ -2.06
RNF220Q5VTB9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF220Q5VTB9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 RNU4-13P-201ENST00000364019 141 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.310-201ENST00000365063 113 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.396-201ENST00000383949 103 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 RNU6-472P-201ENST00000384299 107 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 SNORD116-13-201ENST00000384408 92 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 RNA5SP511-201ENST00000410487 115 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 AL162725.1-201ENST00000435405 301 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF220Q5VTB9 RPS20P10-201ENST00000451209 253 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 SCARNA24.2-201ENST00000516968 130 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 AP001282.2-201ENST00000616149 309 ntBASIC2.18□□□□□ -2.06
RNF220Q5VTB9 MIR335-201ENST00000362173 94 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.237-201ENST00000364439 102 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 MIR520G-201ENST00000385064 90 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 RNA5SP109-201ENST00000391010 116 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF220Q5VTB9 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms