Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RNU6-117P-201ENST00000365415 107 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 SNORA72.4-201ENST00000384174 132 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 SNORD116-13-201ENST00000384408 92 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 MIR518A2-201ENST00000384966 87 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 SNORA26.5-201ENST00000391215 123 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 HMGN2P39-201ENST00000398005 273 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 RNU7-172P-201ENST00000517125 64 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 MIR4513-201ENST00000581077 86 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 AL442067.1-201ENST00000613261 223 ntBASIC2.6□□□□□ -1.99
ATP13A4Q4VNC1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 RNU1-96P-201ENST00000364163 162 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 RNU6-211P-201ENST00000384047 107 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 CST2P1-201ENST00000425770 87 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 Y_RNA.638-201ENST00000459374 113 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 RPL36AP21-201ENST00000490372 323 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 RNU6-63P-201ENST00000516690 95 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 MIR3668-201ENST00000582138 75 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 AC007229.1-201ENST00000590455 412 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 AC004832.4-201ENST00000608952 331 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 AL008718.3-201ENST00000610217 321 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 AL359075.3-201ENST00000613288 217 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 AC073349.3-201ENST00000617616 186 ntBASIC2.59□□□□□ -1.99
ATP13A4Q4VNC1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ATP13A4Q4VNC1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
ATP13A4Q4VNC1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATP13A4Q4VNC1 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.292-201ENST00000364904 97 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 RNU11-3P-201ENST00000391111 133 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 RNA5SP467-201ENST00000391274 118 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 EBAG9P1-201ENST00000418955 543 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.58□□□□□ -2
ATP13A4Q4VNC1 SNORD116-28-201ENST00000516123 91 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 MIR4529-201ENST00000578110 78 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 AC005786.1-201ENST00000588553 154 ntBASIC2.58□□□□□ -2
ATP13A4Q4VNC1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ATP13A4Q4VNC1 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.57□□□□□ -2
ATP13A4Q4VNC1 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNU6-376P-201ENST00000384731 106 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 MIR515-2-201ENST00000384883 83 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 MIR515-1-201ENST00000384884 83 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 MIR1283-2-201ENST00000408621 87 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNA5SP511-201ENST00000410487 115 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AL139156.1-201ENST00000412785 841 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 HSPE1P21-201ENST00000438283 308 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AC104332.1-201ENST00000440471 797 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 U8.19-201ENST00000459095 133 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 RNU7-99P-201ENST00000516271 62 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AP005660.1-201ENST00000522972 293 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AC022513.1-201ENST00000624512 117 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AC068647.2-201ENST00000637380 353 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
ATP13A4Q4VNC1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNU6-899P-201ENST00000363947 107 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 Y_RNA.200-201ENST00000364018 102 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNY4P28-201ENST00000365281 93 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 MIR597-201ENST00000384968 97 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 MTCO2P33-201ENST00000402100 465 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AL162725.1-201ENST00000435405 301 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC099677.2-201ENST00000436385 175 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNU7-141P-201ENST00000459304 62 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 COX6CP14-201ENST00000469580 174 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RPS29P21-201ENST00000496272 170 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNU1-142P-201ENST00000516682 145 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNU7-128P-201ENST00000517247 62 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC015720.1-201ENST00000565251 277 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC005972.2-201ENST00000604690 348 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC011921.3-201ENST00000605540 361 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC013791.1-201ENST00000616619 62 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ATP13A4Q4VNC1 AC134026.1-201ENST00000623249 2239 ntBASIC2.56□□□□□ -2
ATP13A4Q4VNC1 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms