Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Y_RNA.452-201ENST00000384202 108 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 MIR504-201ENST00000385065 83 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 RNU6-1186P-201ENST00000410429 97 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 RN7SKP223-201ENST00000410582 62 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 AL135786.1-201ENST00000415892 214 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 AC099677.2-201ENST00000436385 175 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 AC234781.5-201ENST00000508429 271 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 AC004817.2-201ENST00000561794 651 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 AC022513.1-201ENST00000624512 117 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.79□□□□□ -1.96
CCDC144BQ3MJ40 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 AL391987.6-201ENST00000305671 199 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 RNU1-22P-201ENST00000363334 158 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 EBAG9P1-201ENST00000418955 543 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 RNU7-94P-201ENST00000459576 63 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 SERF1AP1-201ENST00000514575 187 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 MIR5094-201ENST00000578766 85 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 MIR4648-201ENST00000580107 72 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 AL512605.2-201ENST00000592972 256 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC144BQ3MJ40 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC144BQ3MJ40 MIR21-201ENST00000362134 72 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.124-201ENST00000363339 93 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.193-201ENST00000363979 102 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-702P-201ENST00000364982 107 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.518-201ENST00000384552 113 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP467-201ENST00000391274 118 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP501-201ENST00000410990 112 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 AC010409.1-201ENST00000487382 476 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 DEFB108E-201ENST00000524692 240 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 MIR4503-201ENST00000582187 83 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 MIR3149-201ENST00000584629 83 ntBASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC144BQ3MJ40 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.418-201ENST00000384029 102 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.456-201ENST00000384232 111 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-472P-201ENST00000384299 107 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 SNORA8-201ENST00000384574 139 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 MIR562-201ENST00000384894 95 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 MT-TW-201ENST00000387382 68 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-855P-201ENST00000410395 104 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 RPL36AP21-201ENST00000490372 323 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-237P-201ENST00000515985 71 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-1337P-201ENST00000516525 95 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 AC046143.2-201ENST00000609789 160 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 AP001282.2-201ENST00000616149 309 ntBASIC2.76□□□□□ -1.97
CCDC144BQ3MJ40 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 RNU4-80P-201ENST00000363200 141 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP456-201ENST00000364002 114 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.341-201ENST00000365341 102 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.368-201ENST00000365547 113 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.396-201ENST00000383949 103 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.483-201ENST00000384380 101 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 MTCO1P5-201ENST00000433573 344 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 IGKV3-31-201ENST00000523109 329 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 AC021269.2-201ENST00000532318 330 ntBASIC2.75□□□□□ -1.97
CCDC144BQ3MJ40 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.16-201ENST00000362421 102 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 Y_RNA.237-201ENST00000364439 102 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-376P-201ENST00000384731 106 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 AL158823.1-201ENST00000418441 478 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RPS26P45-201ENST00000471748 340 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-191P-201ENST00000516295 94 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RNVU1-2-201ENST00000516326 135 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP281-201ENST00000516504 135 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP82-201ENST00000516707 92 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 MIR3145-201ENST00000580727 82 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 MIR4524B-201ENST00000581569 115 ntBASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CCDC144BQ3MJ40 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 RNU6-117P-201ENST00000365415 107 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 SNORA6-201ENST00000384033 151 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 RNA5SP212-201ENST00000391223 107 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 AL512604.1-201ENST00000404812 257 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 AC084364.2-201ENST00000546924 395 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 SUB1P4-201ENST00000566062 339 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 AC103810.6-201ENST00000606708 136 ntBASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC144BQ3MJ40 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 AL356292.1-201ENST00000283110 373 ntBASIC2.72□□□□□ -1.97
CCDC144BQ3MJ40 MIR520A-201ENST00000384862 85 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms