Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-975P-201ENST00000384296 105 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 SNORA53-201ENST00000391141 249 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 SRIP3-201ENST00000413200 219 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AL445646.1-201ENST00000431784 216 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 POLR2KP2-201ENST00000438155 177 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RPL23AP6-201ENST00000446637 472 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU7-57P-201ENST00000459540 60 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AC093259.1-201ENST00000509755 300 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-436P-201ENST00000516171 114 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-155P-201ENST00000516347 100 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-111P-201ENST00000517179 105 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 MIR5089-201ENST00000580047 84 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.15-201ENST00000611544 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.16-201ENST00000613119 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.12-201ENST00000613778 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.20-201ENST00000613956 192 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AL773524.1-201ENST00000614065 229 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.9-201ENST00000615427 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.14-201ENST00000615943 113 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.11-201ENST00000616345 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.2-201ENST00000616535 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.3-201ENST00000617785 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.19-201ENST00000618602 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU2-1-201ENST00000618664 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.6-201ENST00000619225 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.5-201ENST00000619465 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 U2.10-201ENST00000620268 191 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 AC078938.1-201ENST00000620993 318 ntBASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 RNU6-907P-201ENST00000390924 102 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 MTCO1P5-201ENST00000433573 344 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 MRPS10P1-201ENST00000448483 130 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 SNORA59A-201ENST00000459326 152 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 AC091544.4-201ENST00000555268 342 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 MIR4753-201ENST00000585119 83 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 AC006380.1-201ENST00000603598 186 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 AC141273.2-201ENST00000618989 130 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNAI3Q3KNW1 UBE2WP1-201ENST00000362030 340 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 SNORD115-30-201ENST00000364117 82 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 AL357139.1-201ENST00000407792 426 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 RNU6-948P-201ENST00000516374 107 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 RNA5SP490-201ENST00000517141 136 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 MIR4643-201ENST00000577473 78 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 AC005828.6-201ENST00000606610 232 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 BX284668.6-201ENST00000606899 438 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 U6.115-201ENST00000636045 103 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
SNAI3Q3KNW1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 SNORD27-201ENST00000363981 72 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNU6-438P-201ENST00000365561 103 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNU6-418P-201ENST00000384035 107 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RN7SKP284-201ENST00000411002 343 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNU2-14P-201ENST00000411053 191 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC244636.1-201ENST00000421152 228 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 MTCO1P44-201ENST00000441935 243 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC074290.1-201ENST00000448883 135 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC016717.1-201ENST00000448918 286 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNA5SP57-201ENST00000459463 123 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNU6-221P-201ENST00000459541 99 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC114982.1-201ENST00000469402 321 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RNU6-191P-201ENST00000516295 94 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 SNORA27.4-201ENST00000516650 95 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 RPL21P9-201ENST00000556149 474 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 MIR3684-201ENST00000579779 74 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 DEFB117-201ENST00000602356 141 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
SNAI3Q3KNW1 AC037487.3-201ENST00000606668 112 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms