Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 PIGPP3-201ENST00000425307 415 ntBASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 RNU7-41P-201ENST00000515917 61 ntBASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 RNA5SP20-201ENST00000515976 84 ntBASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 RN7SKP287-201ENST00000516546 266 ntBASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 AC120024.3-201ENST00000603167 156 ntBASIC0.23□□□□□ -2.37
TBC1D28Q2M2D7 Y_RNA.1-201ENST00000352915 104 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 RNU5F-3P-201ENST00000363767 117 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 CALM2P3-201ENST00000400429 449 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 MRPS18CP6-201ENST00000423587 223 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 CYCTP-201ENST00000504253 315 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 RN7SKP164-201ENST00000516138 266 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AF235103.2-201ENST00000525753 346 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AC023442.1-201ENST00000531247 422 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AC093424.1-201ENST00000604999 338 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 AC010999.1-201ENST00000611856 324 ntBASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
TBC1D28Q2M2D7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 SNORA27.1-201ENST00000362604 124 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 SNORD105-201ENST00000386910 85 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 SNORD111-201ENST00000408139 94 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-994P-201ENST00000410507 111 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 RN7SKP142-201ENST00000411236 328 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 MTND3P16-201ENST00000452205 344 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 PCMTD1P1-201ENST00000455560 355 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-415P-201ENST00000516252 97 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 MTATP6P24-201ENST00000576835 677 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 AC005730.3-201ENST00000583067 366 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 AC027279.3-201ENST00000625055 122 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 AC121333.1-201ENST00000567488 2709 ntBASIC0.21□□□□□ -2.38
TBC1D28Q2M2D7 Y_RNA.466-201ENST00000384294 113 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 MIR520C-201ENST00000385005 87 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 MIR452-201ENST00000385020 85 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 MIR1298-201ENST00000408783 112 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 AL137792.2-201ENST00000443484 235 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 AC114811.1-201ENST00000507207 168 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 MIR1273G-201ENST00000577677 100 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 POLR3GP2-201ENST00000588366 668 ntBASIC0.2□□□□□ -2.38
TBC1D28Q2M2D7 SNORA72.3-201ENST00000365074 132 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 MIR140-201ENST00000385282 100 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 MIR1827-201ENST00000408549 66 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-261P-201ENST00000459506 102 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 MTND3P7-201ENST00000474435 343 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 AC083904.1-201ENST00000487828 231 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 SNORA74.3-201ENST00000517108 154 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 AL358944.1-201ENST00000528537 144 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 AC099654.12-201ENST00000639868 649 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 AC073544.1-201ENST00000600110 1595 ntBASIC0.19□□□□□ -2.38
TBC1D28Q2M2D7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-117P-201ENST00000365415 107 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 SNORA69-201ENST00000383895 132 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-136P-201ENST00000384663 107 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR520G-201ENST00000385064 90 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR514A2-201ENST00000385131 88 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR514A3-201ENST00000385132 88 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR516B2-201ENST00000385190 85 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MTCYBP4-201ENST00000401524 249 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-177P-201ENST00000411257 104 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AL358176.2-201ENST00000425769 204 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 RPS3AP17-201ENST00000472594 777 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AC083798.1-201ENST00000472671 131 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 Y_RNA.683-201ENST00000516508 93 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AC134698.4-201ENST00000523451 826 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MTND1P24-201ENST00000552175 861 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR4300-201ENST00000581016 96 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AC073648.5-201ENST00000603502 305 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AP001330.5-201ENST00000607176 411 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR6779-201ENST00000617283 64 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 AC127459.3-201ENST00000624328 466 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
TBC1D28Q2M2D7 SNORD68-201ENST00000363214 84 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-254P-201ENST00000363377 107 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-522P-201ENST00000364497 107 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 SNORD113.3-201ENST00000364630 78 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 Y_RNA.296-201ENST00000364930 108 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-128P-201ENST00000383976 107 ntBASIC0.17□□□□□ -2.38
TBC1D28Q2M2D7 RNU6-95P-201ENST00000384697 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms