Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSRP1Q08945 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSRP1Q08945 MIR411-201ENST00000362239 96 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU6-23P-201ENST00000363283 107 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU1-22P-201ENST00000363334 158 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU6-899P-201ENST00000363947 107 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU6-1048P-201ENST00000364054 107 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 Y_RNA.304-201ENST00000365011 112 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 SNORD116-13-201ENST00000384408 92 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 RPL36AP21-201ENST00000490372 323 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.85□□□□□ -1.95
SSRP1Q08945 RNU6-1278P-201ENST00000516130 107 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 AC004486.1-201ENST00000546846 233 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 AC004832.4-201ENST00000608952 331 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 AC013791.1-201ENST00000616619 62 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 U6.73-201ENST00000619194 103 ntBASIC2.85□□□□□ -1.95
SSRP1Q08945 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
SSRP1Q08945 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
SSRP1Q08945 AL136360.1-201ENST00000503377 1900 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 Y_RNA.262-201ENST00000364641 102 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 RNU6-117P-201ENST00000365415 107 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 RNU6-417P-201ENST00000384712 107 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 MIR518C-201ENST00000384822 101 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 MTCO2P33-201ENST00000402100 465 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 RNU2-64P-201ENST00000411315 191 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.84□□□□□ -1.95
SSRP1Q08945 MTND5P15-201ENST00000434246 349 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 HSPE1P21-201ENST00000438283 308 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 AC104332.1-201ENST00000440471 797 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 AL138752.1-201ENST00000452964 351 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 RNU7-172P-201ENST00000517125 64 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 MIR338-201ENST00000636369 67 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 AC068647.2-201ENST00000637380 353 ntBASIC2.84□□□□□ -1.95
SSRP1Q08945 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
SSRP1Q08945 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSRP1Q08945 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.84□□□□□ -1.96
SSRP1Q08945 AC134026.1-201ENST00000623249 2239 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSRP1Q08945 Y_RNA.29-201ENST00000362570 113 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 SNORA40.19-201ENST00000390846 128 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.83□□□□□ -1.96
SSRP1Q08945 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 RNU7-141P-201ENST00000459304 62 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.83□□□□□ -1.96
SSRP1Q08945 RNU6-63P-201ENST00000516690 95 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 SNORA81.3-201ENST00000517283 198 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.83□□□□□ -1.96
SSRP1Q08945 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.83□□□□□ -1.96
SSRP1Q08945 MIR5692C2-201ENST00000577959 77 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 MIR3169-201ENST00000578032 83 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 Z83818.1-201ENST00000603584 150 ntBASIC2.83□□□□□ -1.96
SSRP1Q08945 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SSRP1Q08945 RNU1-58P-201ENST00000362413 163 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 AL359511.1-201ENST00000402970 211 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 AL355497.1-201ENST00000406262 551 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.82□□□□□ -1.96
SSRP1Q08945 YWHAEP4-201ENST00000505390 198 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 AC007229.1-201ENST00000590455 412 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 AC005972.2-201ENST00000604690 348 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 AL365265.1-201ENST00000621045 234 ntBASIC2.82□□□□□ -1.96
SSRP1Q08945 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.82□□□□□ -1.96
SSRP1Q08945 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SSRP1Q08945 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSRP1Q08945 SNORA25.6-201ENST00000364121 118 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 Y_RNA.644-201ENST00000459006 113 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.81□□□□□ -1.96
SSRP1Q08945 Y_RNA.674-201ENST00000516362 113 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 RNU6-182P-201ENST00000516970 105 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 AC024405.2-202ENST00000532731 184 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.81□□□□□ -1.96
SSRP1Q08945 AC015720.1-201ENST00000565251 277 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.81□□□□□ -1.96
SSRP1Q08945 MIR548AY-201ENST00000617669 107 ntBASIC2.81□□□□□ -1.96
SSRP1Q08945 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSRP1Q08945 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSRP1Q08945 MIR6073-201ENST00000352083 89 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU4-13P-201ENST00000364019 141 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU6-1323P-201ENST00000384025 107 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU6-376P-201ENST00000384731 106 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 MIR515-2-201ENST00000384883 83 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 MIR515-1-201ENST00000384884 83 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SSRP1Q08945 AL117342.1-201ENST00000404861 406 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RNU6-1186P-201ENST00000410429 97 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 RNA5SP511-201ENST00000410487 115 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 Y_RNA.793-201ENST00000411222 111 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 AL135786.1-201ENST00000415892 214 ntBASIC2.8□□□□□ -1.96
SSRP1Q08945 EBAG9P1-201ENST00000418955 543 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms