Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Y_RNA.486-201ENST00000384398 107 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH1Q08174 AC060773.1-201ENST00000421698 310 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 CYCSP35-201ENST00000451978 304 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 CYCTP-201ENST00000504253 315 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 RNU6-1146P-201ENST00000516282 102 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 RNU6-589P-201ENST00000516485 107 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 AC073413.2-201ENST00000604332 360 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PCDH1Q08174 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH1Q08174 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH1Q08174 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH1Q08174 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 MIR483-201ENST00000385070 76 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 Y_RNA.621-201ENST00000411065 96 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH1Q08174 AC244505.4-201ENST00000434905 287 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 SSXP5-201ENST00000443473 287 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 RN7SL293P-201ENST00000481765 281 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 RNU5E-3P-201ENST00000515913 68 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 SNORD33.1-201ENST00000516213 88 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 SNORA18.4-201ENST00000516440 124 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 RNU6-365P-201ENST00000517113 106 ntBASIC3.21□□□□□ -1.9
PCDH1Q08174 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDH1Q08174 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH1Q08174 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH1Q08174 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH1Q08174 RNU1-96P-201ENST00000364163 162 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 MIR624-201ENST00000385217 97 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 RNU6-1186P-201ENST00000410429 97 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 RNU2-48P-201ENST00000410694 191 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 RNU2-63P-201ENST00000410792 194 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 RNA5SP127-201ENST00000411051 133 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 AL365205.2-201ENST00000594586 68 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 AC108081.1-201ENST00000604358 221 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 uc_338.1-201ENST00000612113 180 ntBASIC3.2□□□□□ -1.9
PCDH1Q08174 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH1Q08174 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH1Q08174 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH1Q08174 Y_RNA.52-201ENST00000362760 96 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 Y_RNA.66-201ENST00000362862 102 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 RNU6-647P-201ENST00000364243 107 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 RNU1-33P-201ENST00000364249 162 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 RNU6-309P-201ENST00000364573 106 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 Y_RNA.630-201ENST00000411370 108 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 RPS15AP28-201ENST00000435088 386 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH1Q08174 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 RN7SL807P-201ENST00000470923 297 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 AC007751.1-201ENST00000529260 376 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 AC007229.1-201ENST00000590455 412 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 AC007179.3-201ENST00000604976 235 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 AL670379.3-201ENST00000605040 251 ntBASIC3.19□□□□□ -1.9
PCDH1Q08174 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH1Q08174 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH1Q08174 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDH1Q08174 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 snoU2-30.2-201ENST00000362805 70 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 RNU6-755P-201ENST00000364400 103 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PCDH1Q08174 NDUFA4P2-201ENST00000489989 244 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 AC011406.1-201ENST00000512440 370 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 RNU7-99P-201ENST00000516271 62 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 RNU1-104P-201ENST00000517280 175 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH1Q08174 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH1Q08174 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 Z83843.1-201ENST00000604070 3685 ntBASIC3.18□□□□□ -1.9
PCDH1Q08174 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH1Q08174 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH1Q08174 RNU6-508P-201ENST00000363231 103 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 SNORD58C-201ENST00000365223 64 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 SNORA22-201ENST00000383907 134 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 RNU11-5P-201ENST00000391216 129 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 MIR891A-201ENST00000401237 79 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 Y_RNA.617-201ENST00000410920 90 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 AC006028.1-201ENST00000438379 402 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 RPL21P10-201ENST00000463521 490 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 RPS26P45-201ENST00000471748 340 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 HMGN1P7-201ENST00000491722 313 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 RNU6-504P-201ENST00000516568 104 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 RNU7-128P-201ENST00000517247 62 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH1Q08174 NDUFA5P6-201ENST00000542110 379 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH1Q08174 AC091178.2-201ENST00000584401 117 ntBASIC3.17□□□□□ -1.9
PCDH1Q08174 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH1Q08174 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH1Q08174 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDH1Q08174 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms