Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Y_RNA.570-201ENST00000384750 101 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RPL21P1-201ENST00000399532 476 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC016909.1-201ENST00000415916 166 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.35□□□□□ -2.19
CKAP4Q07065 AC005002.2-201ENST00000438228 269 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AL118496.2-201ENST00000448300 230 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 MTND5P22-201ENST00000458380 195 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU6-897P-201ENST00000517135 105 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC025647.1-201ENST00000517879 253 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.35□□□□□ -2.19
CKAP4Q07065 AC136932.1-201ENST00000574771 208 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 MIR3169-201ENST00000578032 83 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC136443.5-201ENST00000603741 370 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 AC005828.6-201ENST00000606610 232 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 Y_RNA.101-201ENST00000363154 102 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 Y_RNA.152-201ENST00000363578 100 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNA5SP493-201ENST00000364115 91 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 Y_RNA.361-201ENST00000365515 120 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 SNORA70B-201ENST00000384210 135 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU6-1199P-201ENST00000411249 104 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU6-57P-201ENST00000411348 103 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.34□□□□□ -2.19
CKAP4Q07065 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.34□□□□□ -2.19
CKAP4Q07065 AC060773.1-201ENST00000421698 310 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 ELOCP20-201ENST00000422460 345 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 MTND2P23-201ENST00000422990 651 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AL358176.2-201ENST00000425769 204 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU6-327P-201ENST00000516270 127 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU6-1045P-201ENST00000516321 107 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AL117187.1-201ENST00000555482 181 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AC005176.2-201ENST00000596933 147 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AC008737.2-201ENST00000599446 118 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AL353149.1-201ENST00000610667 244 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 AC004467.1-201ENST00000615678 330 ntBASIC1.34□□□□□ -2.19
CKAP4Q07065 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
CKAP4Q07065 Y_RNA.210-201ENST00000364161 110 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 Y_RNA.243-201ENST00000364481 109 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 Y_RNA.500-201ENST00000384466 111 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CKAP4Q07065 SNORD115-46-201ENST00000390982 71 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU11-3P-201ENST00000391111 133 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU6-121P-201ENST00000410525 99 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNA5SP501-201ENST00000410990 112 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU5A-5P-201ENST00000411054 116 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AL390729.2-201ENST00000416137 156 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 TRBV12-1-201ENST00000479785 344 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU6-1046P-201ENST00000516538 107 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 RNU6-107P-201ENST00000516643 102 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.33□□□□□ -2.2
CKAP4Q07065 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 MIR3684-201ENST00000579779 74 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
CKAP4Q07065 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AC022441.3-201ENST00000605737 136 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AC013412.1-201ENST00000610687 192 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AL590240.4-201ENST00000616908 390 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AC130454.1-201ENST00000622948 401 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 AC022513.1-201ENST00000624512 117 ntBASIC1.33□□□□□ -2.2
CKAP4Q07065 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CKAP4Q07065 Y_RNA.105-201ENST00000363182 111 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 Y_RNA.143-201ENST00000363520 106 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-770P-201ENST00000363929 105 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-1240P-201ENST00000365155 104 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-937P-201ENST00000384325 106 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-1109P-201ENST00000391187 107 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AL117342.1-201ENST00000404861 406 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 MIR1285-1-201ENST00000408593 84 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU2-54P-201ENST00000410299 190 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AC008134.1-201ENST00000420943 193 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AL731563.1-201ENST00000442202 214 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.32□□□□□ -2.2
CKAP4Q07065 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 MRPS35P2-201ENST00000508242 191 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-1143P-201ENST00000516125 104 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-397P-201ENST00000516226 104 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 RNU6-966P-201ENST00000516479 104 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.32□□□□□ -2.2
CKAP4Q07065 MIR4300-201ENST00000581016 96 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 U6.115-201ENST00000636045 103 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 AL159152.1-201ENST00000635019 2587 ntBASIC1.32□□□□□ -2.2
CKAP4Q07065 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CKAP4Q07065 SNORD114-7-201ENST00000362520 77 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 Y_RNA.26-201ENST00000362539 101 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 Y_RNA.111-201ENST00000363248 100 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 RNU6-23P-201ENST00000363283 107 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 Y_RNA.133-201ENST00000363428 110 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 RNU6-1175P-201ENST00000365200 107 ntBASIC1.31□□□□□ -2.2
CKAP4Q07065 Y_RNA.446-201ENST00000384178 104 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms