Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 MIR4753-201ENST00000585119 83 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 snoZ196.1-201ENST00000625269 89 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NKX3-2P78367 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
NKX3-2P78367 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NKX3-2P78367 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NKX3-2P78367 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NKX3-2P78367 SNORA27.1-201ENST00000362604 124 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RNU4-11P-201ENST00000365287 132 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RNU6-975P-201ENST00000384296 105 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 MIR518C-201ENST00000384822 101 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RNU2-51P-201ENST00000410708 197 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RN7SKP192-201ENST00000411291 327 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RNU6-57P-201ENST00000411348 103 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX3-2P78367 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX3-2P78367 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX3-2P78367 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX3-2P78367 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX3-2P78367 AC008413.1-201ENST00000511864 177 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 AC107027.2-201ENST00000512197 115 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 RNU7-115P-201ENST00000516433 55 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 MIR4724-201ENST00000579485 89 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 U4.3-201ENST00000621047 82 ntBASIC2.93□□□□□ -1.94
NKX3-2P78367 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
NKX3-2P78367 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX3-2P78367 SNORD114-7-201ENST00000362520 77 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 MIR218-1-201ENST00000384999 110 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 FO393413.1-201ENST00000402892 195 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 SNORA36B-201ENST00000410438 131 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX3-2P78367 RPL30P4-201ENST00000429309 333 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AL121914.1-201ENST00000450188 156 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 RNU6-221P-201ENST00000459541 99 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC090515.1-201ENST00000465295 476 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC010409.1-201ENST00000487382 476 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 RNU6-237P-201ENST00000515985 71 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 SNORA25.12-201ENST00000516202 82 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 RNA5SP320-201ENST00000516263 124 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 RNU6-965P-201ENST00000516721 96 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX3-2P78367 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AL365222.1-201ENST00000614661 98 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX3-2P78367 MIR548AY-201ENST00000617669 107 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 AC012640.5-201ENST00000623897 319 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NKX3-2P78367 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NKX3-2P78367 AC007336.1-201ENST00000576365 3828 ntBASIC2.92□□□□□ -1.94
NKX3-2P78367 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NKX3-2P78367 AL356292.1-201ENST00000283110 373 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 MIR367-201ENST00000362299 68 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RNU6-407P-201ENST00000365280 104 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RNU6-144P-201ENST00000383951 107 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 SNORA20-201ENST00000384662 132 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 MIR592-201ENST00000384959 97 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 AL606845.1-201ENST00000404881 255 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 AC006461.1-201ENST00000412637 326 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 snoU13.15-201ENST00000459407 104 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RPS26P55-201ENST00000471178 356 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 UBL5P3-201ENST00000475112 231 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RNU6-63P-201ENST00000516690 95 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 RNU6-586P-201ENST00000517265 104 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 SCARNA11.3-201ENST00000517276 130 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 DNAJC19P2-201ENST00000593340 302 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 AL391903.3-201ENST00000612158 163 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 MIR7515-201ENST00000637837 67 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NKX3-2P78367 AC010332.2-201ENST00000613083 1904 ntBASIC2.91□□□□□ -1.94
NKX3-2P78367 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.91□□□□□ -1.94
NKX3-2P78367 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NKX3-2P78367 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NKX3-2P78367 RNU6-1290P-201ENST00000362957 109 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 SNORD31B-201ENST00000364977 69 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 RNU6-418P-201ENST00000384035 107 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 SNORA22C-201ENST00000384614 134 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 RNU6-417P-201ENST00000384712 107 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 HSPE1P13-201ENST00000451143 297 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 SEM1P1-201ENST00000506694 209 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 AC010598.1-201ENST00000510378 103 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 RNU6-479P-201ENST00000516348 105 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 MIR5688-201ENST00000580619 83 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 MIR1248-201ENST00000629190 106 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NKX3-2P78367 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX3-2P78367 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX3-2P78367 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX3-2P78367 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NKX3-2P78367 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NKX3-2P78367 AL159152.1-201ENST00000635019 2587 ntBASIC2.9□□□□□ -1.95
NKX3-2P78367 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX3-2P78367 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
NKX3-2P78367 MIR15B-201ENST00000385045 98 ntBASIC2.89□□□□□ -1.95
NKX3-2P78367 RNU6-1154P-201ENST00000391001 104 ntBASIC2.89□□□□□ -1.95
NKX3-2P78367 AC114982.1-201ENST00000469402 321 ntBASIC2.89□□□□□ -1.95
NKX3-2P78367 RN7SL499P-201ENST00000481141 276 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms