Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AF250324.2-201ENST00000608299 610 ntBASIC-0.33□□□□□ -2.46
VBP1P61758 AC009248.2-201ENST00000619826 254 ntBASIC-0.33□□□□□ -2.46
VBP1P61758 AC127459.3-201ENST00000624328 466 ntBASIC-0.33□□□□□ -2.46
VBP1P61758 RNU6-222P-201ENST00000362438 107 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 SNORD114-26-201ENST00000363543 72 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 MIR644A-201ENST00000385262 94 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 RNU2-54P-201ENST00000410299 190 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 MTCYBP8-201ENST00000422855 651 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.34□□□□□ -2.46
VBP1P61758 RNU7-180P-201ENST00000459240 63 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 SNORA40.12-201ENST00000516329 111 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.34□□□□□ -2.46
VBP1P61758 MTND2P38-201ENST00000522536 667 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 ELOCP32-201ENST00000548625 324 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 AL157687.1-201ENST00000554853 619 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 AC090897.1-201ENST00000580909 226 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 AC006504.8-201ENST00000621046 635 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.34□□□□□ -2.46
VBP1P61758 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.34□□□□□ -2.46
VBP1P61758 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
VBP1P61758 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 U8.5-201ENST00000364528 136 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 RNU6V-201ENST00000384105 107 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 RNU6-159P-201ENST00000391080 106 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.35□□□□□ -2.47
VBP1P61758 BX295541.1-201ENST00000417774 250 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.35□□□□□ -2.47
VBP1P61758 AC079354.2-201ENST00000453523 154 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 SNORD45.4-201ENST00000516629 73 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.35□□□□□ -2.47
VBP1P61758 AC133485.4-201ENST00000561835 220 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 MIR3682-201ENST00000581338 84 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 MIR4762-201ENST00000585261 75 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.35□□□□□ -2.47
VBP1P61758 RNU6-181P-201ENST00000363225 107 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 BTF3P11-201ENST00000426582 477 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 RNU4-49P-201ENST00000516080 140 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 RNU6-445P-201ENST00000516949 107 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 AP002963.1-201ENST00000530590 184 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 Z94722.1-201ENST00000604328 474 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 uc_338.6-201ENST00000613544 171 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 AC107308.1-201ENST00000615897 301 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 AC091925.1-201ENST00000623204 462 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 AC009161.2-201ENST00000624626 138 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 AC068137.4-201ENST00000638485 296 ntBASIC-0.36□□□□□ -2.47
VBP1P61758 RNU6-187P-201ENST00000384139 106 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MIR15B-201ENST00000385045 98 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MIR513B-201ENST00000385136 84 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
VBP1P61758 MIR938-201ENST00000401216 83 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MTCO2P33-201ENST00000402100 465 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MLLT10P1-201ENST00000418346 262 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MTCO2P27-201ENST00000420740 428 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.37□□□□□ -2.47
VBP1P61758 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.37□□□□□ -2.47
VBP1P61758 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.37□□□□□ -2.47
VBP1P61758 AC093303.1-201ENST00000514549 295 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 RNU7-129P-201ENST00000516128 62 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 RN7SKP287-201ENST00000516546 266 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.37□□□□□ -2.47
VBP1P61758 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.37□□□□□ -2.47
VBP1P61758 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 AL391834.2-201ENST00000609982 546 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 AL121757.2-201ENST00000611223 313 ntBASIC-0.37□□□□□ -2.47
VBP1P61758 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
VBP1P61758 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RNA5SP128-201ENST00000365305 116 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 SNORA2A-201ENST00000383885 135 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RNU6-125P-201ENST00000384505 107 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RNU6-541P-201ENST00000384709 110 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 MIR598-201ENST00000384868 97 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 SNRPGP10-201ENST00000432323 225 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
VBP1P61758 RNU7-102P-201ENST00000458948 62 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RPL30P10-201ENST00000488148 337 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RPL23AP54-201ENST00000495129 419 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 RNA5SP436-201ENST00000516020 115 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.38□□□□□ -2.47
VBP1P61758 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.38□□□□□ -2.47
VBP1P61758 MIR6515-201ENST00000619843 57 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 MIR499B-201ENST00000636498 73 ntBASIC-0.38□□□□□ -2.47
VBP1P61758 MIR377-201ENST00000362145 69 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 MIR330-201ENST00000362196 94 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 SNORD115-32-201ENST00000364079 82 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 SNORD50B-201ENST00000364995 70 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 RNY1P14-201ENST00000384426 108 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 RNY3P9-201ENST00000384727 106 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 MIR522-201ENST00000385071 87 ntBASIC-0.39□□□□□ -2.47
VBP1P61758 MIR153-2-201ENST00000385225 87 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms