Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC245047.8-201ENST00000456455 284 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 S100A11P2-201ENST00000467589 312 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 RPL23AP54-201ENST00000495129 419 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 RNU6-1041P-201ENST00000516254 102 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 MIR3144-201ENST00000579460 79 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 MIR5688-201ENST00000580619 83 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 MIR4744-201ENST00000581563 82 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 U6.73-201ENST00000619194 103 ntBASIC2.45□□□□□ -2.02
CLRN1P58418 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLRN1P58418 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLRN1P58418 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLRN1P58418 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLRN1P58418 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CLRN1P58418 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLRN1P58418 snoU2-30.2-201ENST00000362805 70 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU6-103P-201ENST00000363686 107 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 Y_RNA.229-201ENST00000364347 113 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU1-109P-201ENST00000383960 147 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 Y_RNA.441-201ENST00000384123 112 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU6-125P-201ENST00000384505 107 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 SNORA44-201ENST00000384584 132 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU6-578P-201ENST00000390980 103 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.44□□□□□ -2.02
CLRN1P58418 SEPT7P4-201ENST00000437076 306 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU6-1146P-201ENST00000516282 102 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 RNU6-1007P-201ENST00000516586 107 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.44□□□□□ -2.02
CLRN1P58418 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.44□□□□□ -2.02
CLRN1P58418 AC108706.1-201ENST00000611053 297 ntBASIC2.44□□□□□ -2.02
CLRN1P58418 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLRN1P58418 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLRN1P58418 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLRN1P58418 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLRN1P58418 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLRN1P58418 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.43□□□□□ -2.02
CLRN1P58418 Y_RNA.23-201ENST00000362496 106 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RNU6-275P-201ENST00000364910 107 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 Y_RNA.398-201ENST00000383952 99 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RNU6-187P-201ENST00000384139 106 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RNU6-376P-201ENST00000384731 106 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 MIR128-1-201ENST00000384921 82 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 MIR616-201ENST00000385293 97 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 MT-TT-201ENST00000387460 66 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 EDDM3CP-201ENST00000415977 425 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RNU7-26P-201ENST00000458980 63 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RNU6-437P-201ENST00000459408 95 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 Y_RNA.703-201ENST00000516846 111 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 MTND5P41-201ENST00000517498 206 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLRN1P58418 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLRN1P58418 AL365361.1-201ENST00000566942 3481 ntBASIC2.43□□□□□ -2.02
CLRN1P58418 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CLRN1P58418 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLRN1P58418 Y_RNA.272-201ENST00000364696 102 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 RNU6-160P-201ENST00000384591 107 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AL138827.1-201ENST00000402666 306 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 NDUFB4P4-201ENST00000404822 243 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 RNU6-1186P-201ENST00000410429 97 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.42□□□□□ -2.02
CLRN1P58418 EBAG9P1-201ENST00000418955 543 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AL353689.1-201ENST00000438895 199 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.42□□□□□ -2.02
CLRN1P58418 MIR3200-201ENST00000580767 85 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AC005000.2-201ENST00000605468 310 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 AL137790.1-201ENST00000634283 177 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 MIR338-201ENST00000636369 67 ntBASIC2.42□□□□□ -2.02
CLRN1P58418 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.42□□□□□ -2.02
CLRN1P58418 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.41□□□□□ -2.02
CLRN1P58418 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CLRN1P58418 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
CLRN1P58418 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLRN1P58418 RNU1-96P-201ENST00000364163 162 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 RNA5SP467-201ENST00000391274 118 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 AL590004.2-201ENST00000404787 371 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 AL135938.1-201ENST00000443141 297 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 RPS4XP11-201ENST00000446897 772 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.41□□□□□ -2.02
CLRN1P58418 RNU1-131P-201ENST00000458943 161 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 RN7SL499P-201ENST00000481141 276 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 RPS29P21-201ENST00000496272 170 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 RNU7-200P-201ENST00000516105 62 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 AC073413.2-201ENST00000604332 360 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
CLRN1P58418 AL391903.3-201ENST00000612158 163 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 AC022202.1-201ENST00000613515 211 ntBASIC2.41□□□□□ -2.02
CLRN1P58418 Z82195.2-201ENST00000612348 18351 ntBASIC2.4□□□□□ -2.02
CLRN1P58418 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLRN1P58418 Y_RNA.357-201ENST00000365487 109 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 SNORA72-201ENST00000384339 132 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 SNORA48.2-201ENST00000390926 124 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 AL606845.1-201ENST00000404881 255 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 AL392103.1-201ENST00000447000 198 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 RNU6-346P-201ENST00000516288 111 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 AC109810.1-201ENST00000534066 224 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 CYCSP26-201ENST00000534107 320 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 LARP7P3-201ENST00000579888 337 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms