Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU6-482P-201ENST00000391068 107 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 AL355497.1-201ENST00000406262 551 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 MIR548F4-201ENST00000408515 105 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN2P57739 AC069257.2-201ENST00000441819 155 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 AL021397.1-201ENST00000451806 248 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 RNA5SP20-201ENST00000515976 84 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN2P57739 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN2P57739 AL117187.1-201ENST00000555482 181 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 MIR4438-201ENST00000585271 93 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.93□□□□□ -2.1
CLDN2P57739 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.93□□□□□ -2.1
CLDN2P57739 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN2P57739 RNU4-90P-201ENST00000362773 141 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU6-324P-201ENST00000363957 106 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 MIR144-201ENST00000384886 86 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 Y_RNA.581-201ENST00000391017 97 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU4-30P-201ENST00000410245 143 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU6-121P-201ENST00000410525 99 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN2P57739 AL158823.1-201ENST00000418441 478 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
CLDN2P57739 RPS26P55-201ENST00000471178 356 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU6-436P-201ENST00000516171 114 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNVU1-2-201ENST00000516326 135 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU6-966P-201ENST00000516479 104 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 RNU1-142P-201ENST00000516682 145 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 AC027419.1-201ENST00000522976 328 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN2P57739 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 MIR5094-201ENST00000578766 85 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN2P57739 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN2P57739 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
CLDN2P57739 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.91□□□□□ -2.1
CLDN2P57739 Y_RNA.105-201ENST00000363182 111 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 RNU6-407P-201ENST00000365280 104 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 RNU6-713P-201ENST00000384761 107 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 RNA5SP323-201ENST00000391094 133 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AL358176.2-201ENST00000425769 204 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AC024067.1-201ENST00000426199 223 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 HSPE1P13-201ENST00000451143 297 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.91□□□□□ -2.1
CLDN2P57739 RNU6-496P-201ENST00000516145 99 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 RNU7-99P-201ENST00000516271 62 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 RNU6-635P-201ENST00000516651 102 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.91□□□□□ -2.1
CLDN2P57739 AP003733.2-201ENST00000529409 171 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AC023157.2-201ENST00000540596 141 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 MIR6895-201ENST00000613497 78 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
CLDN2P57739 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN2P57739 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CLDN2P57739 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
CLDN2P57739 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN2P57739 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 Y_RNA.176-201ENST00000363815 109 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 Y_RNA.222-201ENST00000364264 102 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RNU6-505P-201ENST00000384427 107 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RNA5SP467-201ENST00000391274 118 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RNU6-710P-201ENST00000410424 105 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 Y_RNA.602-201ENST00000410535 92 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RNU2-61P-201ENST00000411069 191 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 POLR2KP2-201ENST00000438155 177 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RPL23AP3-201ENST00000453844 468 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 MTATP8P1-201ENST00000467115 207 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN2P57739 AC097462.1-201ENST00000514125 324 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN2P57739 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN2P57739 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 AC127459.3-201ENST00000624328 466 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN2P57739 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.11
CLDN2P57739 Y_RNA.64-201ENST00000362845 102 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 SNORD81.1-201ENST00000363064 77 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 Y_RNA.149-201ENST00000363558 117 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 Y_RNA.329-201ENST00000365209 107 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 Y_RNA.383-201ENST00000383855 97 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 Y_RNA.574-201ENST00000384766 95 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 EBAG9P1-201ENST00000418955 543 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN2P57739 DYNLT3P2-201ENST00000442517 295 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 MTND4LP30-201ENST00000454092 297 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms