Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.23□□□□□ -2.05
SUMO3P55854 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.23□□□□□ -2.05
SUMO3P55854 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
SUMO3P55854 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
SUMO3P55854 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
SUMO3P55854 MIR6073-201ENST00000352083 89 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 Y_RNA.510-201ENST00000384511 114 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 RNU6-376P-201ENST00000384731 106 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 MIR548H3-201ENST00000408771 118 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 Y_RNA.618-201ENST00000410949 107 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 AL162725.1-201ENST00000435405 301 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 AC069257.2-201ENST00000441819 155 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 RPS20P10-201ENST00000451209 253 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 AC004486.1-201ENST00000546846 233 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 AC084364.2-201ENST00000546924 395 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.22□□□□□ -2.05
SUMO3P55854 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.22□□□□□ -2.05
SUMO3P55854 AC073413.2-201ENST00000604332 360 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.22□□□□□ -2.05
SUMO3P55854 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 U2.14-201ENST00000615943 113 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 SCARNA15.3-201ENST00000626315 122 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 SCARNA4.1-201ENST00000628597 123 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
SUMO3P55854 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SUMO3P55854 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SUMO3P55854 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.21□□□□□ -2.06
SUMO3P55854 Y_RNA.172-201ENST00000363765 102 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.21□□□□□ -2.06
SUMO3P55854 RNA5SP511-201ENST00000410487 115 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.21□□□□□ -2.06
SUMO3P55854 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.21□□□□□ -2.06
SUMO3P55854 RNU7-94P-201ENST00000459576 63 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 RNU6-63P-201ENST00000516690 95 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 AC005972.2-201ENST00000604690 348 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 AC004832.4-201ENST00000608952 331 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.21□□□□□ -2.06
SUMO3P55854 AL078604.3-201ENST00000615580 211 ntBASIC2.21□□□□□ -2.06
SUMO3P55854 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SUMO3P55854 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.2□□□□□ -2.06
SUMO3P55854 RNU6-801P-201ENST00000364087 105 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 Y_RNA.217-201ENST00000364214 105 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 Y_RNA.275-201ENST00000364726 110 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 Y_RNA.478-201ENST00000384358 107 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 SNORD116-13-201ENST00000384408 92 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 AC245047.4-201ENST00000433189 144 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 AL135790.2-201ENST00000437701 267 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 Y_RNA.641-201ENST00000459414 105 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 AC015720.1-201ENST00000565251 277 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 AC103810.6-201ENST00000606708 136 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
SUMO3P55854 ZNF702P-202ENST00000434269 1966 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 AC018630.2-201ENST00000534866 2403 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SUMO3P55854 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
SUMO3P55854 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 Y_RNA.416-201ENST00000384014 113 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 RNU6-1323P-201ENST00000384025 107 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 MIR562-201ENST00000384894 95 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 MT-TG-201ENST00000387429 68 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SUMO3P55854 AL603910.2-201ENST00000407268 136 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.19□□□□□ -2.06
SUMO3P55854 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
SUMO3P55854 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
SUMO3P55854 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SUMO3P55854 RNU4-13P-201ENST00000364019 141 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 Y_RNA.307-201ENST00000365022 117 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 SNORA72.4-201ENST00000384174 132 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 Y_RNA.447-201ENST00000384184 113 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 RNU6-662P-201ENST00000384253 104 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 RNU6-136P-201ENST00000384663 107 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 MIR520G-201ENST00000385064 90 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 AL513328.1-201ENST00000446460 224 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.18□□□□□ -2.06
SUMO3P55854 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
SUMO3P55854 MIR4672-201ENST00000583126 81 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 AC091178.2-201ENST00000584401 117 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 BX284668.6-201ENST00000606899 438 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 MIR6079-201ENST00000635807 62 ntBASIC2.18□□□□□ -2.06
SUMO3P55854 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SUMO3P55854 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
SUMO3P55854 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SUMO3P55854 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SUMO3P55854 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SUMO3P55854 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SUMO3P55854 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 SNORA63D-201ENST00000364359 132 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 RNU6-740P-201ENST00000364734 105 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 MIR520A-201ENST00000384862 85 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 RNA5SP212-201ENST00000391223 107 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
SUMO3P55854 RNA5SP100-201ENST00000410903 110 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms