Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC091178.2-201ENST00000584401 117 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AC125232.2-201ENST00000592457 143 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AL117336.2-201ENST00000602435 335 ntBASIC0.73□□□□□ -2.29
CDH6P55285 MIR6128-201ENST00000615528 109 ntBASIC0.73□□□□□ -2.29
CDH6P55285 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
CDH6P55285 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AC100810.6-201ENST00000638068 285 ntBASIC0.73□□□□□ -2.29
CDH6P55285 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
CDH6P55285 AC073544.1-201ENST00000600110 1595 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RNU6-596P-201ENST00000365395 98 ntBASIC0.72□□□□□ -2.29
CDH6P55285 RNU6-1264P-201ENST00000383891 107 ntBASIC0.72□□□□□ -2.29
CDH6P55285 RNU6-842P-201ENST00000384269 107 ntBASIC0.72□□□□□ -2.29
CDH6P55285 Y_RNA.490-201ENST00000384413 102 ntBASIC0.72□□□□□ -2.29
CDH6P55285 RNU6-373P-201ENST00000411247 98 ntBASIC0.72□□□□□ -2.29
CDH6P55285 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
CDH6P55285 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.72□□□□□ -2.29
CDH6P55285 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
CDH6P55285 RPS26P48-201ENST00000491713 339 ntBASIC0.72□□□□□ -2.29
CDH6P55285 RNU6-341P-201ENST00000516973 96 ntBASIC0.72□□□□□ -2.29
CDH6P55285 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.72□□□□□ -2.29
CDH6P55285 AP002004.2-201ENST00000531656 154 ntBASIC0.72□□□□□ -2.29
CDH6P55285 AC011604.1-201ENST00000545978 196 ntBASIC0.72□□□□□ -2.29
CDH6P55285 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
CDH6P55285 MIR4452-201ENST00000583004 71 ntBASIC0.72□□□□□ -2.29
CDH6P55285 AL357075.2-201ENST00000614906 189 ntBASIC0.72□□□□□ -2.29
CDH6P55285 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDH6P55285 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
CDH6P55285 SNORA27.1-201ENST00000362604 124 ntBASIC0.71□□□□□ -2.3
CDH6P55285 Y_RNA.194-201ENST00000363985 102 ntBASIC0.71□□□□□ -2.3
CDH6P55285 Y_RNA.402-201ENST00000383972 102 ntBASIC0.71□□□□□ -2.3
CDH6P55285 RNU6-831P-201ENST00000384548 107 ntBASIC0.71□□□□□ -2.3
CDH6P55285 MIR499A-201ENST00000384903 122 ntBASIC0.71□□□□□ -2.3
CDH6P55285 RNU6-1148P-201ENST00000410992 104 ntBASIC0.71□□□□□ -2.3
CDH6P55285 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.71□□□□□ -2.3
CDH6P55285 MTND4LP16-201ENST00000440828 295 ntBASIC0.71□□□□□ -2.3
CDH6P55285 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
CDH6P55285 LINC01399-202ENST00000458450 244 ntBASIC0.71□□□□□ -2.3
CDH6P55285 RNU7-21P-201ENST00000459430 62 ntBASIC0.71□□□□□ -2.3
CDH6P55285 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.71□□□□□ -2.3
CDH6P55285 SNORD111.1-201ENST00000516421 86 ntBASIC0.71□□□□□ -2.3
CDH6P55285 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.71□□□□□ -2.3
CDH6P55285 AC024909.2-201ENST00000553035 286 ntBASIC0.71□□□□□ -2.3
CDH6P55285 MIR3684-201ENST00000579779 74 ntBASIC0.71□□□□□ -2.3
CDH6P55285 MIR3662-201ENST00000637030 95 ntBASIC0.71□□□□□ -2.3
CDH6P55285 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CDH6P55285 RNA5SP361-201ENST00000362686 118 ntBASIC0.7□□□□□ -2.3
CDH6P55285 MIR329-1-201ENST00000385028 80 ntBASIC0.7□□□□□ -2.3
CDH6P55285 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
CDH6P55285 ELOCP21-201ENST00000412558 336 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC009161.1-201ENST00000417306 376 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.7□□□□□ -2.3
CDH6P55285 AC233266.1-201ENST00000454518 96 ntBASIC0.7□□□□□ -2.3
CDH6P55285 RNU7-90P-201ENST00000459216 62 ntBASIC0.7□□□□□ -2.3
CDH6P55285 RNU7-87P-201ENST00000459343 62 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.7□□□□□ -2.3
CDH6P55285 RNU6-1278P-201ENST00000516130 107 ntBASIC0.7□□□□□ -2.3
CDH6P55285 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC090617.3-201ENST00000573670 475 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC242852.1-201ENST00000612151 96 ntBASIC0.7□□□□□ -2.3
CDH6P55285 AC244015.1-201ENST00000622301 99 ntBASIC0.7□□□□□ -2.3
CDH6P55285 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CDH6P55285 CASC19-280ENST00000642102 1351 ntBASIC0.7□□□□□ -2.3
CDH6P55285 MIRLET7C-201ENST00000362160 84 ntBASIC0.69□□□□□ -2.3
CDH6P55285 Y_RNA.473-201ENST00000384333 102 ntBASIC0.69□□□□□ -2.3
CDH6P55285 SNORD116-13-201ENST00000384408 92 ntBASIC0.69□□□□□ -2.3
CDH6P55285 SNORA75.2-201ENST00000391138 150 ntBASIC0.69□□□□□ -2.3
CDH6P55285 SNORA75.3-201ENST00000391231 150 ntBASIC0.69□□□□□ -2.3
CDH6P55285 MTCYBP4-201ENST00000401524 249 ntBASIC0.69□□□□□ -2.3
CDH6P55285 EIF1P2-201ENST00000428233 350 ntBASIC0.69□□□□□ -2.3
CDH6P55285 DLGAP5P1-201ENST00000430307 464 ntBASIC0.69□□□□□ -2.3
CDH6P55285 AL137792.2-201ENST00000443484 235 ntBASIC0.69□□□□□ -2.3
CDH6P55285 MTND2P22-201ENST00000444325 1033 ntBASIC0.69□□□□□ -2.3
CDH6P55285 MTND1P17-201ENST00000448961 204 ntBASIC0.69□□□□□ -2.3
CDH6P55285 PCNPP5-201ENST00000452246 481 ntBASIC0.69□□□□□ -2.3
CDH6P55285 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
CDH6P55285 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
CDH6P55285 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
CDH6P55285 RNU6-566P-201ENST00000516790 107 ntBASIC0.69□□□□□ -2.3
CDH6P55285 RNU6-1116P-201ENST00000517269 99 ntBASIC0.69□□□□□ -2.3
CDH6P55285 PRELID3BP2-201ENST00000605362 201 ntBASIC0.69□□□□□ -2.3
CDH6P55285 AC004832.4-201ENST00000608952 331 ntBASIC0.69□□□□□ -2.3
CDH6P55285 AL096861.1-201ENST00000610899 123 ntBASIC0.69□□□□□ -2.3
CDH6P55285 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CDH6P55285 RNU6-1013P-201ENST00000384180 107 ntBASIC0.68□□□□□ -2.3
CDH6P55285 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
CDH6P55285 MIR526A1-201ENST00000384897 85 ntBASIC0.68□□□□□ -2.3
CDH6P55285 MIR190B-201ENST00000401119 79 ntBASIC0.68□□□□□ -2.3
CDH6P55285 MTND3P21-201ENST00000433774 331 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AC245047.8-201ENST00000456455 284 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AL049830.1-201ENST00000468034 425 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.68□□□□□ -2.3
CDH6P55285 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.68□□□□□ -2.3
CDH6P55285 Y_RNA.676-201ENST00000516393 96 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.68□□□□□ -2.3
CDH6P55285 MIR4790-201ENST00000577799 79 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CDH6P55285 AC048344.4-201ENST00000619744 527 ntBASIC0.68□□□□□ -2.3
CDH6P55285 RNU6-879P-201ENST00000364328 108 ntBASIC0.67□□□□□ -2.3
CDH6P55285 RNU4-41P-201ENST00000364426 143 ntBASIC0.67□□□□□ -2.3
CDH6P55285 RNU6-136P-201ENST00000384663 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms