Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COPAP53621 MRPS10P1-201ENST00000448483 130 ntBASIC2.32□□□□□ -2.04
COPAP53621 AC011406.1-201ENST00000512440 370 ntBASIC2.32□□□□□ -2.04
COPAP53621 SERF1AP1-201ENST00000514575 187 ntBASIC2.32□□□□□ -2.04
COPAP53621 SNORA70.12-201ENST00000516084 153 ntBASIC2.32□□□□□ -2.04
COPAP53621 RNU6-436P-201ENST00000516171 114 ntBASIC2.32□□□□□ -2.04
COPAP53621 SUMO2P18-201ENST00000518873 252 ntBASIC2.32□□□□□ -2.04
COPAP53621 AC027419.1-201ENST00000522976 328 ntBASIC2.32□□□□□ -2.04
COPAP53621 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.32□□□□□ -2.04
COPAP53621 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.32□□□□□ -2.04
COPAP53621 MIR3169-201ENST00000578032 83 ntBASIC2.32□□□□□ -2.04
COPAP53621 MIR7843-201ENST00000622274 79 ntBASIC2.32□□□□□ -2.04
COPAP53621 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
COPAP53621 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COPAP53621 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COPAP53621 Y_RNA.188-201ENST00000363952 111 ntBASIC2.31□□□□□ -2.04
COPAP53621 Y_RNA.329-201ENST00000365209 107 ntBASIC2.31□□□□□ -2.04
COPAP53621 Y_RNA.350-201ENST00000365409 98 ntBASIC2.31□□□□□ -2.04
COPAP53621 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
COPAP53621 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
COPAP53621 RNU6-1248P-201ENST00000391096 64 ntBASIC2.31□□□□□ -2.04
COPAP53621 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
COPAP53621 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
COPAP53621 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
COPAP53621 ATP5J2P3-201ENST00000451550 258 ntBASIC2.31□□□□□ -2.04
COPAP53621 SNORD65B-201ENST00000459126 73 ntBASIC2.31□□□□□ -2.04
COPAP53621 AC010598.1-201ENST00000510378 103 ntBASIC2.31□□□□□ -2.04
COPAP53621 RNU6-1146P-201ENST00000516282 102 ntBASIC2.31□□□□□ -2.04
COPAP53621 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.31□□□□□ -2.04
COPAP53621 DEFB117-201ENST00000602356 141 ntBASIC2.31□□□□□ -2.04
COPAP53621 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
COPAP53621 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
COPAP53621 Y_RNA.136-201ENST00000363444 102 ntBASIC2.3□□□□□ -2.04
COPAP53621 RNU6-271P-201ENST00000363858 105 ntBASIC2.3□□□□□ -2.04
COPAP53621 Y_RNA.307-201ENST00000365022 117 ntBASIC2.3□□□□□ -2.04
COPAP53621 MIR548H3-201ENST00000408771 118 ntBASIC2.3□□□□□ -2.04
COPAP53621 AL353689.1-201ENST00000438895 199 ntBASIC2.3□□□□□ -2.04
COPAP53621 MRPS17P9-201ENST00000511924 393 ntBASIC2.3□□□□□ -2.04
COPAP53621 RNU6-1271P-201ENST00000517049 105 ntBASIC2.3□□□□□ -2.04
COPAP53621 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.3□□□□□ -2.04
COPAP53621 AC110588.1-201ENST00000559699 137 ntBASIC2.3□□□□□ -2.04
COPAP53621 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.3□□□□□ -2.04
COPAP53621 AC012433.1-201ENST00000588916 398 ntBASIC2.3□□□□□ -2.04
COPAP53621 AC005828.6-201ENST00000606610 232 ntBASIC2.3□□□□□ -2.04
COPAP53621 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
COPAP53621 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.3□□□□□ -2.04
COPAP53621 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COPAP53621 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
COPAP53621 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COPAP53621 Y_RNA.418-201ENST00000384029 102 ntBASIC2.29□□□□□ -2.04
COPAP53621 SNORA20B-201ENST00000384220 132 ntBASIC2.29□□□□□ -2.04
COPAP53621 Y_RNA.489-201ENST00000384410 101 ntBASIC2.29□□□□□ -2.04
COPAP53621 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
COPAP53621 RNU6-710P-201ENST00000410424 105 ntBASIC2.29□□□□□ -2.04
COPAP53621 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
COPAP53621 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
COPAP53621 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
COPAP53621 MIR3145-201ENST00000580727 82 ntBASIC2.29□□□□□ -2.04
COPAP53621 AL512605.2-201ENST00000592972 256 ntBASIC2.29□□□□□ -2.04
COPAP53621 AL096840.1-201ENST00000603287 93 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.15-201ENST00000611544 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.16-201ENST00000613119 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.12-201ENST00000613778 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.9-201ENST00000615427 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.11-201ENST00000616345 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
COPAP53621 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
COPAP53621 AC006435.5-201ENST00000624486 112 ntBASIC2.29□□□□□ -2.04
COPAP53621 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.29□□□□□ -2.04
COPAP53621 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
COPAP53621 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
COPAP53621 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
COPAP53621 snoU2-30.2-201ENST00000362805 70 ntBASIC2.28□□□□□ -2.04
COPAP53621 RNU4-80P-201ENST00000363200 141 ntBASIC2.28□□□□□ -2.04
COPAP53621 Y_RNA.352-201ENST00000365439 102 ntBASIC2.28□□□□□ -2.04
COPAP53621 Y_RNA.447-201ENST00000384184 113 ntBASIC2.28□□□□□ -2.04
COPAP53621 Y_RNA.562-201ENST00000384695 113 ntBASIC2.28□□□□□ -2.04
COPAP53621 MT-TG-201ENST00000387429 68 ntBASIC2.28□□□□□ -2.04
COPAP53621 MIR873-201ENST00000401120 77 ntBASIC2.28□□□□□ -2.04
COPAP53621 AL355796.1-201ENST00000406706 323 ntBASIC2.28□□□□□ -2.04
COPAP53621 MIR1283-2-201ENST00000408621 87 ntBASIC2.28□□□□□ -2.04
COPAP53621 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.28□□□□□ -2.04
COPAP53621 MTCO1P5-201ENST00000433573 344 ntBASIC2.28□□□□□ -2.04
COPAP53621 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.28□□□□□ -2.04
COPAP53621 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
COPAP53621 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COPAP53621 SNORD114-7-201ENST00000362520 77 ntBASIC2.27□□□□□ -2.05
COPAP53621 SNORA27.1-201ENST00000362604 124 ntBASIC2.27□□□□□ -2.05
COPAP53621 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
COPAP53621 RNU6-407P-201ENST00000365280 104 ntBASIC2.27□□□□□ -2.05
COPAP53621 Y_RNA.478-201ENST00000384358 107 ntBASIC2.27□□□□□ -2.05
COPAP53621 RNU6-417P-201ENST00000384712 107 ntBASIC2.27□□□□□ -2.05
COPAP53621 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms