Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
COPB1P53618 Y_RNA.789-201ENST00000622480 102 ntBASIC2.36□□□□□ -2.03
COPB1P53618 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.36□□□□□ -2.03
COPB1P53618 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
COPB1P53618 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.36□□□□□ -2.03
COPB1P53618 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-743P-201ENST00000364151 106 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU1-91P-201ENST00000364746 163 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-438P-201ENST00000365561 103 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-662P-201ENST00000384253 104 ntBASIC2.35□□□□□ -2.03
COPB1P53618 SNORD14D-201ENST00000384390 87 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-1289P-201ENST00000384431 106 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AL355796.1-201ENST00000406706 323 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU2-61P-201ENST00000411069 191 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AC123900.1-201ENST00000420390 96 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AL135790.2-201ENST00000437701 267 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AL137159.1-201ENST00000452808 512 ntBASIC2.35□□□□□ -2.03
COPB1P53618 SNORD2.1-201ENST00000458762 69 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-138P-201ENST00000515952 107 ntBASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-667P-201ENST00000517186 102 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.35□□□□□ -2.03
COPB1P53618 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
COPB1P53618 AL512605.2-201ENST00000592972 256 ntBASIC2.35□□□□□ -2.03
COPB1P53618 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COPB1P53618 RNU6-324P-201ENST00000363957 106 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNY4P28-201ENST00000365281 93 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU6-1235P-201ENST00000384559 107 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU2-64P-201ENST00000411315 191 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU6-57P-201ENST00000411348 103 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AC074290.1-201ENST00000448883 135 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
COPB1P53618 snoU13.15-201ENST00000459407 104 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU6-498P-201ENST00000459468 107 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU6-991P-201ENST00000516168 107 ntBASIC2.34□□□□□ -2.03
COPB1P53618 RNU2-34P-201ENST00000516534 121 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AC025647.1-201ENST00000517879 253 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.34□□□□□ -2.03
COPB1P53618 NDUFA5P6-201ENST00000542110 379 ntBASIC2.34□□□□□ -2.03
COPB1P53618 AL442067.1-201ENST00000613261 223 ntBASIC2.34□□□□□ -2.03
COPB1P53618 U4atac.1-201ENST00000618345 95 ntBASIC2.34□□□□□ -2.03
COPB1P53618 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
COPB1P53618 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
COPB1P53618 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COPB1P53618 SNORD114-7-201ENST00000362520 77 ntBASIC2.33□□□□□ -2.04
COPB1P53618 SNORA20B-201ENST00000384220 132 ntBASIC2.33□□□□□ -2.04
COPB1P53618 AL357134.1-201ENST00000445848 426 ntBASIC2.33□□□□□ -2.04
COPB1P53618 SUMO1P2-201ENST00000452524 304 ntBASIC2.33□□□□□ -2.04
COPB1P53618 SNORD65B-201ENST00000459126 73 ntBASIC2.33□□□□□ -2.04
COPB1P53618 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COPB1P53618 SNORD116-28-201ENST00000516123 91 ntBASIC2.33□□□□□ -2.04
COPB1P53618 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
COPB1P53618 AC087441.2-201ENST00000529141 262 ntBASIC2.33□□□□□ -2.04
COPB1P53618 MIR4769-201ENST00000584126 77 ntBASIC2.33□□□□□ -2.04
COPB1P53618 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
COPB1P53618 MIR6132-201ENST00000622083 109 ntBASIC2.33□□□□□ -2.04
COPB1P53618 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.33□□□□□ -2.04
COPB1P53618 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
COPB1P53618 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
COPB1P53618 RNU6-801P-201ENST00000364087 105 ntBASIC2.32□□□□□ -2.04
COPB1P53618 Y_RNA.274-201ENST00000364714 101 ntBASIC2.32□□□□□ -2.04
COPB1P53618 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
COPB1P53618 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
COPB1P53618 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
COPB1P53618 RNU6-1248P-201ENST00000391096 64 ntBASIC2.32□□□□□ -2.04
COPB1P53618 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.32□□□□□ -2.04
COPB1P53618 Z98949.2-201ENST00000440996 144 ntBASIC2.32□□□□□ -2.04
COPB1P53618 Y_RNA.637-201ENST00000459424 114 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.32□□□□□ -2.04
COPB1P53618 AC010598.1-201ENST00000510378 103 ntBASIC2.32□□□□□ -2.04
COPB1P53618 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.32□□□□□ -2.04
COPB1P53618 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AL449363.1-201ENST00000617815 186 ntBASIC2.32□□□□□ -2.04
COPB1P53618 snoU18.1-201ENST00000629629 71 ntBASIC2.32□□□□□ -2.04
COPB1P53618 AL159152.1-201ENST00000635019 2587 ntBASIC2.31□□□□□ -2.04
COPB1P53618 RNU6-1272P-201ENST00000362776 107 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.124-201ENST00000363339 93 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.200-201ENST00000364018 102 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.292-201ENST00000364904 97 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.785-201ENST00000384290 109 ntBASIC2.31□□□□□ -2.04
COPB1P53618 MIR1298-201ENST00000408783 112 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.590-201ENST00000410140 107 ntBASIC2.31□□□□□ -2.04
COPB1P53618 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COPB1P53618 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
COPB1P53618 PRELID3BP1-201ENST00000457142 540 ntBASIC2.31□□□□□ -2.04
COPB1P53618 COX6CP14-201ENST00000469580 174 ntBASIC2.31□□□□□ -2.04
COPB1P53618 Y_RNA.700-201ENST00000516806 100 ntBASIC2.31□□□□□ -2.04
COPB1P53618 AC136628.3-201ENST00000521868 290 ntBASIC2.31□□□□□ -2.04
COPB1P53618 DEFB122-202ENST00000569013 197 ntBASIC2.31□□□□□ -2.04
COPB1P53618 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.31□□□□□ -2.04
COPB1P53618 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
COPB1P53618 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms