Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC114482.1-201ENST00000418010 247 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.75□□□□□ -2.13
LBX1P52954 AC099677.2-201ENST00000436385 175 ntBASIC1.75□□□□□ -2.13
LBX1P52954 Y_RNA.631-201ENST00000459607 101 ntBASIC1.75□□□□□ -2.13
LBX1P52954 Y_RNA.661-201ENST00000516003 99 ntBASIC1.75□□□□□ -2.13
LBX1P52954 RNU1-117P-201ENST00000517041 158 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC025647.1-201ENST00000517879 253 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC005786.1-201ENST00000588553 154 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC005828.6-201ENST00000606610 232 ntBASIC1.75□□□□□ -2.13
LBX1P52954 AC007485.1-201ENST00000616755 206 ntBASIC1.75□□□□□ -2.13
LBX1P52954 U6.92-201ENST00000636464 89 ntBASIC1.75□□□□□ -2.13
LBX1P52954 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
LBX1P52954 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LBX1P52954 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LBX1P52954 RNU6-879P-201ENST00000364328 108 ntBASIC1.74□□□□□ -2.13
LBX1P52954 RNU6-708P-201ENST00000384217 107 ntBASIC1.74□□□□□ -2.13
LBX1P52954 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LBX1P52954 SNORD12B-201ENST00000410433 91 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.74□□□□□ -2.13
LBX1P52954 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.74□□□□□ -2.13
LBX1P52954 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
LBX1P52954 RNU7-57P-201ENST00000459540 60 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC010469.2-201ENST00000496412 480 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC093852.1-201ENST00000503587 266 ntBASIC1.74□□□□□ -2.13
LBX1P52954 MRPS17P9-201ENST00000511924 393 ntBASIC1.74□□□□□ -2.13
LBX1P52954 RNU6-948P-201ENST00000516374 107 ntBASIC1.74□□□□□ -2.13
LBX1P52954 RN7SKP295-201ENST00000517264 153 ntBASIC1.74□□□□□ -2.13
LBX1P52954 SUMO2P18-201ENST00000518873 252 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC018448.1-201ENST00000552843 316 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC006600.1-201ENST00000572529 153 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AC010205.1-201ENST00000616668 449 ntBASIC1.74□□□□□ -2.13
LBX1P52954 AL138825.1-201ENST00000618587 192 ntBASIC1.74□□□□□ -2.13
LBX1P52954 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
LBX1P52954 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LBX1P52954 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
LBX1P52954 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LBX1P52954 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LBX1P52954 Y_RNA.28-201ENST00000362554 111 ntBASIC1.73□□□□□ -2.13
LBX1P52954 Y_RNA.80-201ENST00000362996 102 ntBASIC1.73□□□□□ -2.13
LBX1P52954 Y_RNA.128-201ENST00000363391 112 ntBASIC1.73□□□□□ -2.13
LBX1P52954 RNA5SP457-201ENST00000363657 124 ntBASIC1.73□□□□□ -2.13
LBX1P52954 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
LBX1P52954 Y_RNA.445-201ENST00000384168 102 ntBASIC1.73□□□□□ -2.13
LBX1P52954 RNU6-308P-201ENST00000390957 107 ntBASIC1.73□□□□□ -2.13
LBX1P52954 SNORD78.2-201ENST00000391076 69 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR1302-11-201ENST00000408051 138 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR548P-201ENST00000408336 84 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR1302-9-201ENST00000408365 138 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR1302-10-201ENST00000408734 138 ntBASIC1.73□□□□□ -2.13
LBX1P52954 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
LBX1P52954 SDAD1P3-201ENST00000427380 333 ntBASIC1.73□□□□□ -2.13
LBX1P52954 AC096644.2-201ENST00000429278 159 ntBASIC1.73□□□□□ -2.13
LBX1P52954 Y_RNA.701-201ENST00000516812 110 ntBASIC1.73□□□□□ -2.13
LBX1P52954 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR4423-201ENST00000580922 80 ntBASIC1.73□□□□□ -2.13
LBX1P52954 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.73□□□□□ -2.13
LBX1P52954 AC005034.5-201ENST00000604219 466 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR1302-2-201ENST00000607096 138 ntBASIC1.73□□□□□ -2.13
LBX1P52954 MIR338-201ENST00000636369 67 ntBASIC1.73□□□□□ -2.13
LBX1P52954 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
LBX1P52954 Y_RNA.39-201ENST00000362620 98 ntBASIC1.72□□□□□ -2.13
LBX1P52954 Y_RNA.132-201ENST00000363421 102 ntBASIC1.72□□□□□ -2.13
LBX1P52954 RNU6-454P-201ENST00000364292 107 ntBASIC1.72□□□□□ -2.13
LBX1P52954 SNORA8-201ENST00000384574 139 ntBASIC1.72□□□□□ -2.13
LBX1P52954 Y_RNA.645-201ENST00000391229 102 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
LBX1P52954 RAB28P5-201ENST00000427490 651 ntBASIC1.72□□□□□ -2.13
LBX1P52954 HMGN2P34-201ENST00000437647 269 ntBASIC1.72□□□□□ -2.13
LBX1P52954 UQCRBP2-201ENST00000447827 297 ntBASIC1.72□□□□□ -2.13
LBX1P52954 PCNPP5-201ENST00000452246 481 ntBASIC1.72□□□□□ -2.13
LBX1P52954 RNU7-169P-201ENST00000459456 61 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.72□□□□□ -2.13
LBX1P52954 AC011406.1-201ENST00000512440 370 ntBASIC1.72□□□□□ -2.13
LBX1P52954 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AC055872.1-201ENST00000570978 278 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AC044792.1-201ENST00000593294 196 ntBASIC1.72□□□□□ -2.13
LBX1P52954 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AC130454.1-201ENST00000622948 401 ntBASIC1.72□□□□□ -2.13
LBX1P52954 MIR6767-201ENST00000637302 66 ntBASIC1.72□□□□□ -2.13
LBX1P52954 AL159152.1-201ENST00000635019 2587 ntBASIC1.71□□□□□ -2.14
LBX1P52954 snoU2-30.2-201ENST00000362805 70 ntBASIC1.71□□□□□ -2.14
LBX1P52954 RNU6-961P-201ENST00000363893 105 ntBASIC1.71□□□□□ -2.14
LBX1P52954 Y_RNA.287-201ENST00000364853 94 ntBASIC1.71□□□□□ -2.14
LBX1P52954 RNU6-1227P-201ENST00000383981 107 ntBASIC1.71□□□□□ -2.14
LBX1P52954 RNU6-57P-201ENST00000411348 103 ntBASIC1.71□□□□□ -2.14
LBX1P52954 AC245047.4-201ENST00000433189 144 ntBASIC1.71□□□□□ -2.14
LBX1P52954 FCF1P4-201ENST00000448326 183 ntBASIC1.71□□□□□ -2.14
LBX1P52954 AC074290.1-201ENST00000448883 135 ntBASIC1.71□□□□□ -2.14
LBX1P52954 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.71□□□□□ -2.14
LBX1P52954 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
LBX1P52954 RNU7-128P-201ENST00000517247 62 ntBASIC1.71□□□□□ -2.14
LBX1P52954 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
LBX1P52954 U6.108-201ENST00000637764 58 ntBASIC1.71□□□□□ -2.14
LBX1P52954 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
LBX1P52954 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
LBX1P52954 MTCO2P12-201ENST00000427426 682 ntBASIC1.7□□□□□ -2.14
LBX1P52954 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.7□□□□□ -2.14
LBX1P52954 RNU2-12P-201ENST00000517216 168 ntBASIC1.7□□□□□ -2.14
LBX1P52954 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms