Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 AC104984.5-201ENST00000586878 94 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 AC245060.5-201ENST00000610778 3293 ntBASIC1.94□□□□□ -2.1
CLCNKAP51800 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLCNKAP51800 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLCNKAP51800 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CLCNKAP51800 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLCNKAP51800 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 RNU6-1240P-201ENST00000365155 104 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 SNORA20B-201ENST00000384220 132 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 AL390729.2-201ENST00000416137 156 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 HMGN2P34-201ENST00000437647 269 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 AC005042.3-201ENST00000453230 174 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLCNKAP51800 RNU6-1143P-201ENST00000516125 104 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLCNKAP51800 AC006380.1-201ENST00000603598 186 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 AC022513.1-201ENST00000624512 117 ntBASIC1.93□□□□□ -2.1
CLCNKAP51800 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLCNKAP51800 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLCNKAP51800 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.93□□□□□ -2.1
CLCNKAP51800 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
CLCNKAP51800 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 Y_RNA.124-201ENST00000363339 93 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 Y_RNA.243-201ENST00000364481 109 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 Y_RNA.376-201ENST00000365638 108 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 RNU6-574P-201ENST00000384265 107 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 Y_RNA.541-201ENST00000384640 113 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLCNKAP51800 Y_RNA.581-201ENST00000391017 97 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 RPL23AP36-201ENST00000413895 458 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCNKAP51800 ATP5J2P3-201ENST00000451550 258 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCNKAP51800 MIR3145-201ENST00000580727 82 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 MIR8062-201ENST00000621515 85 ntBASIC1.92□□□□□ -2.1
CLCNKAP51800 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLCNKAP51800 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLCNKAP51800 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CLCNKAP51800 Y_RNA.16-201ENST00000362421 102 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 Y_RNA.84-201ENST00000363011 104 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 SNORA33-201ENST00000363664 130 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 RNU6-324P-201ENST00000363957 106 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 Y_RNA.396-201ENST00000383949 103 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 Y_RNA.461-201ENST00000384263 103 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 Y_RNA.483-201ENST00000384380 101 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 RNU6-417P-201ENST00000384712 107 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 MT-TW-201ENST00000387382 68 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 MIR1253-201ENST00000408273 105 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 MRPS10P1-201ENST00000448483 130 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 RNU6-436P-201ENST00000516171 114 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 AC023157.2-201ENST00000540596 141 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.91□□□□□ -2.1
CLCNKAP51800 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 AC005828.6-201ENST00000606610 232 ntBASIC1.91□□□□□ -2.1
CLCNKAP51800 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.91□□□□□ -2.1
CLCNKAP51800 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCNKAP51800 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLCNKAP51800 RNU4-90P-201ENST00000362773 141 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 Y_RNA.144-201ENST00000363521 113 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 Y_RNA.329-201ENST00000365209 107 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CLCNKAP51800 AL117342.1-201ENST00000404861 406 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 MIR1289-2-201ENST00000408360 111 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.9□□□□□ -2.11
CLCNKAP51800 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCNKAP51800 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CLCNKAP51800 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCNKAP51800 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 AC010598.1-201ENST00000510378 103 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
CLCNKAP51800 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCNKAP51800 MIR6715A-201ENST00000615929 79 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
CLCNKAP51800 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLCNKAP51800 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
CLCNKAP51800 RNU6-862P-201ENST00000362804 105 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms