Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
CPT1AP50416 U2.12-201ENST00000613778 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.20-201ENST00000613956 192 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.9-201ENST00000615427 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.11-201ENST00000616345 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.2-201ENST00000616535 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.3-201ENST00000617785 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.19-201ENST00000618602 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 RNU2-1-201ENST00000618664 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.5-201ENST00000619465 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 U2.10-201ENST00000620268 191 ntBASIC2.34□□□□□ -2.03
CPT1AP50416 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CPT1AP50416 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CPT1AP50416 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPT1AP50416 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPT1AP50416 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CPT1AP50416 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 RNU6-326P-201ENST00000365480 107 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 Y_RNA.518-201ENST00000384552 113 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 AL603825.1-201ENST00000438481 80 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 AL353689.1-201ENST00000438895 199 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 SNORD127-201ENST00000458892 86 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 RNU6-1041P-201ENST00000516254 102 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 RNU2-31P-201ENST00000516954 155 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 SCARNA24.2-201ENST00000516968 130 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 AC023157.2-201ENST00000540596 141 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.33□□□□□ -2.04
CPT1AP50416 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.33□□□□□ -2.04
CPT1AP50416 MIR3169-201ENST00000578032 83 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 MIR3145-201ENST00000580727 82 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 AC062037.2-201ENST00000610137 73 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
CPT1AP50416 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CPT1AP50416 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
CPT1AP50416 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPT1AP50416 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CPT1AP50416 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CPT1AP50416 RNU1-58P-201ENST00000362413 163 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 Y_RNA.418-201ENST00000384029 102 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 RNU2-2P-201ENST00000410396 191 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 RNU2-38P-201ENST00000410856 79 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 HMGN2P34-201ENST00000437647 269 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 SERF1AP1-201ENST00000514575 187 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 RNU6-1146P-201ENST00000516282 102 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 SUMO2P18-201ENST00000518873 252 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 AC006435.5-201ENST00000624486 112 ntBASIC2.32□□□□□ -2.04
CPT1AP50416 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CPT1AP50416 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 MIR335-201ENST00000362173 94 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 SNORA27.1-201ENST00000362604 124 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 Y_RNA.136-201ENST00000363444 102 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 RNU6-407P-201ENST00000365280 104 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 Y_RNA.401-201ENST00000383965 117 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 HMGN2P39-201ENST00000398005 273 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 MIR873-201ENST00000401120 77 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
CPT1AP50416 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
CPT1AP50416 ATP5J2P3-201ENST00000451550 258 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
CPT1AP50416 RNU6-1132P-201ENST00000459214 107 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 SNORA70.12-201ENST00000516084 153 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.31□□□□□ -2.04
CPT1AP50416 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.31□□□□□ -2.04
CPT1AP50416 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.31□□□□□ -2.04
CPT1AP50416 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
CPT1AP50416 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CPT1AP50416 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 Y_RNA.14-201ENST00000362415 103 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 SNORD114-7-201ENST00000362520 77 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RNU4-80P-201ENST00000363200 141 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 Y_RNA.124-201ENST00000363339 93 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RNU6-271P-201ENST00000363858 105 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RNU6-514P-201ENST00000384208 107 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 MIR583-201ENST00000384846 75 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 AC024067.1-201ENST00000426199 223 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 MTCO1P5-201ENST00000433573 344 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RPL23AP7-203ENST00000449021 469 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 MTND4LP30-201ENST00000454092 297 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RPS27P22-201ENST00000478056 241 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 RNA5SP458-201ENST00000516188 119 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.3□□□□□ -2.04
CPT1AP50416 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.3□□□□□ -2.04
CPT1AP50416 AC012433.1-201ENST00000588916 398 ntBASIC2.3□□□□□ -2.04
CPT1AP50416 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CPT1AP50416 Y_RNA.287-201ENST00000364853 94 ntBASIC2.29□□□□□ -2.04
CPT1AP50416 RNU6-417P-201ENST00000384712 107 ntBASIC2.29□□□□□ -2.04
CPT1AP50416 RNU11-3P-201ENST00000391111 133 ntBASIC2.29□□□□□ -2.04
CPT1AP50416 RNU2-61P-201ENST00000411069 191 ntBASIC2.29□□□□□ -2.04
CPT1AP50416 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 265.3 ms