Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.55□□□□□ -2.5
SRP9P49458 AL365184.2-201ENST00000431139 435 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.55□□□□□ -2.5
SRP9P49458 RNU7-167P-201ENST00000459160 62 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 RNU7-159P-201ENST00000459284 62 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 RPL23AP75-201ENST00000491601 451 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 SCARNA8-201ENST00000515924 131 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 RNA5SP20-201ENST00000515976 84 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 SNORD27.1-201ENST00000516319 72 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 AC240442.1-201ENST00000616055 283 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 AC013437.2-201ENST00000639587 677 ntBASIC-0.55□□□□□ -2.5
SRP9P49458 SNORD114-28-201ENST00000363610 72 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 RNA5SP117-201ENST00000365294 118 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 MIR570-201ENST00000384917 97 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 SNORD28B-201ENST00000390993 75 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 U8.21-201ENST00000459536 136 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 AC091179.3-201ENST00000474761 144 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 RPL17P19-201ENST00000489069 552 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 RNU4-49P-201ENST00000516080 140 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 AC091144.1-201ENST00000519573 138 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 AL358944.1-201ENST00000528537 144 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.56□□□□□ -2.5
SRP9P49458 AC087683.1-201ENST00000591187 441 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 AC064836.2-201ENST00000609491 462 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 MIR499B-201ENST00000636498 73 ntBASIC-0.56□□□□□ -2.5
SRP9P49458 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 RNU6-873P-201ENST00000363833 107 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 SNORD114-12-201ENST00000365400 75 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 SNORA2A-201ENST00000383885 135 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 RNU6-636P-201ENST00000384598 107 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AL049545.1-201ENST00000401856 572 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 MTCO2P33-201ENST00000402100 465 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 GPR143P-201ENST00000434155 205 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.57□□□□□ -2.5
SRP9P49458 USP9YP12-201ENST00000450481 570 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AC005042.3-201ENST00000453230 174 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 RNU7-138P-201ENST00000459479 64 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AC104692.1-201ENST00000472406 90 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.57□□□□□ -2.5
SRP9P49458 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.57□□□□□ -2.5
SRP9P49458 MIR4743-201ENST00000584576 69 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AL591926.4-201ENST00000616895 298 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 AL138960.2-201ENST00000625145 535 ntBASIC-0.57□□□□□ -2.5
SRP9P49458 MIR377-201ENST00000362145 69 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.58□□□□□ -2.5
SRP9P49458 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 RNU6-320P-201ENST00000516511 106 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 AC104576.1-201ENST00000524225 88 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 AC022878.1-201ENST00000530684 149 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 MIR548AR-201ENST00000582191 57 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 Z84480.1-201ENST00000605131 311 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 AL021368.1-201ENST00000607490 540 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 AF250324.2-201ENST00000608299 610 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 U2.17-201ENST00000611454 95 ntBASIC-0.58□□□□□ -2.5
SRP9P49458 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SRP9P49458 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 SNORA8.3-201ENST00000384679 139 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.59□□□□□ -2.5
SRP9P49458 MTND4P32-201ENST00000437189 1237 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 AC079354.2-201ENST00000453523 154 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.59□□□□□ -2.5
SRP9P49458 RNU7-102P-201ENST00000458948 62 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 RNU6-107P-201ENST00000516643 102 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 MIR3941-201ENST00000582572 103 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 AC018714.1-201ENST00000605028 208 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 AL670379.3-201ENST00000605040 251 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 MIR7107-201ENST00000611489 80 ntBASIC-0.59□□□□□ -2.5
SRP9P49458 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 RNU6-364P-201ENST00000384387 107 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 RNU6-83P-201ENST00000384568 112 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 MT-TN-201ENST00000387400 73 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 SNORA26-201ENST00000391286 122 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 MIR892B-201ENST00000401279 77 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 SSR1P2-201ENST00000415208 787 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 BTF3P11-201ENST00000426582 477 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 ZNF114P1-201ENST00000453500 292 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.6□□□□□ -2.51
SRP9P49458 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.51
SRP9P49458 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.6□□□□□ -2.51
SRP9P49458 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.6□□□□□ -2.51
SRP9P49458 MIR5583-1-201ENST00000580941 59 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 AP000753.3-201ENST00000604083 169 ntBASIC-0.6□□□□□ -2.51
SRP9P49458 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.6□□□□□ -2.51
SRP9P49458 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
SRP9P49458 SNORA27.1-201ENST00000362604 124 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 SNORD115-8-201ENST00000363856 82 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 U8.5-201ENST00000364528 136 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 SNORD115-38-201ENST00000365037 82 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 MIR329-1-201ENST00000385028 80 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
SRP9P49458 HMGN2P22-201ENST00000427588 175 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.61□□□□□ -2.51
SRP9P49458 AL353572.1-201ENST00000442490 417 ntBASIC-0.61□□□□□ -2.51
SRP9P49458 AL137792.2-201ENST00000443484 235 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms