Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
GRIA4P48058 SNORD11-201ENST00000459124 84 ntBASIC3.29□□□□□ -1.88
GRIA4P48058 NDUFA5P6-201ENST00000542110 379 ntBASIC3.29□□□□□ -1.88
GRIA4P48058 EIF4BP1-201ENST00000554881 351 ntBASIC3.29□□□□□ -1.88
GRIA4P48058 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
GRIA4P48058 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
GRIA4P48058 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GRIA4P48058 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GRIA4P48058 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
GRIA4P48058 RNU6-1209P-201ENST00000363655 107 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 RNU6-743P-201ENST00000364151 106 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 Y_RNA.634-201ENST00000364811 113 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.28□□□□□ -1.88
GRIA4P48058 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.28□□□□□ -1.88
GRIA4P48058 CYCSP49-201ENST00000420810 319 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 RPL39P40-201ENST00000445481 146 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
GRIA4P48058 RNU7-107P-201ENST00000459121 61 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.28□□□□□ -1.88
GRIA4P48058 AC023141.11-201ENST00000508864 202 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 AC131055.1-201ENST00000584626 316 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 JPX_2.1-201ENST00000614161 69 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
GRIA4P48058 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
GRIA4P48058 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GRIA4P48058 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNU6-1138P-201ENST00000365359 106 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 MIR562-201ENST00000384894 95 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNU6-1064P-201ENST00000410626 104 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNU2-52P-201ENST00000410680 190 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
GRIA4P48058 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNA5SP76-201ENST00000516277 87 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 MIR4513-201ENST00000581077 86 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
GRIA4P48058 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.27□□□□□ -1.89
GRIA4P48058 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GRIA4P48058 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GRIA4P48058 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GRIA4P48058 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
GRIA4P48058 RNU1-23P-201ENST00000363361 144 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 SNORD18B-201ENST00000365659 72 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GRIA4P48058 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 RPS29P12-201ENST00000460178 152 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 OR9P1P-201ENST00000496431 281 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 RNU6-991P-201ENST00000516168 107 ntBASIC3.26□□□□□ -1.89
GRIA4P48058 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GRIA4P48058 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
GRIA4P48058 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
GRIA4P48058 AC138915.1-201ENST00000565427 1685 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 RNU1-96P-201ENST00000364163 162 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 RNU6-1336P-201ENST00000383886 109 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 MIR561-201ENST00000385216 97 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GRIA4P48058 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GRIA4P48058 COTL1P1-201ENST00000422309 375 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 RPS15AP28-201ENST00000435088 386 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.25□□□□□ -1.89
GRIA4P48058 RNU7-149P-201ENST00000516739 59 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 RNU6-1096P-201ENST00000517089 102 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 Pinc.1-201ENST00000616452 154 ntBASIC3.25□□□□□ -1.89
GRIA4P48058 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
GRIA4P48058 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GRIA4P48058 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GRIA4P48058 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GRIA4P48058 U8.1-201ENST00000362843 134 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 Y_RNA.91-201ENST00000363042 107 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 Y_RNA.500-201ENST00000384466 111 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 Y_RNA.510-201ENST00000384511 114 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 RNU6-476P-201ENST00000384726 107 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 AL158823.1-201ENST00000418441 478 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 HMGN2P34-201ENST00000437647 269 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 RN7SL863P-201ENST00000462370 296 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.24□□□□□ -1.89
GRIA4P48058 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 MIR4298-201ENST00000584380 73 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 MIR6852-201ENST00000621699 66 ntBASIC3.24□□□□□ -1.89
GRIA4P48058 RNU6-235P-201ENST00000362644 107 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 RNU6-153P-201ENST00000364422 104 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 RNU6-1144P-201ENST00000384247 104 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 RPL32P35-201ENST00000415214 394 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
GRIA4P48058 AC060773.1-201ENST00000421698 310 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 RNU7-99P-201ENST00000516271 62 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 AC007229.1-201ENST00000590455 412 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
GRIA4P48058 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms