Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 RNU6-417P-201ENST00000384712 107 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 MRPL35P1-201ENST00000404272 572 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 RAB28P5-201ENST00000427490 651 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 AC096644.2-201ENST00000429278 159 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 AL160004.2-201ENST00000432935 350 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.56□□□□□ -2.16
NEDD4P46934 CHEK2P4-201ENST00000450340 246 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 SNORD65B-201ENST00000459126 73 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
NEDD4P46934 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 RNU6-408P-201ENST00000515910 100 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NEDD4P46934 AL359075.3-201ENST00000613288 217 ntBASIC1.56□□□□□ -2.16
NEDD4P46934 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.55□□□□□ -2.16
NEDD4P46934 RNU6-296P-201ENST00000384608 107 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 MIR1287-201ENST00000408492 90 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 SDAD1P3-201ENST00000427380 333 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 AC245047.4-201ENST00000433189 144 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 AC093852.1-201ENST00000503587 266 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 RNU1-142P-201ENST00000516682 145 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 RNA5SP481-201ENST00000516814 122 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.55□□□□□ -2.16
NEDD4P46934 MIR5188-201ENST00000583467 113 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 RPS29P30-201ENST00000600975 111 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 MIR8070-201ENST00000616510 88 ntBASIC1.55□□□□□ -2.16
NEDD4P46934 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NEDD4P46934 SNORA63D-201ENST00000364359 132 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 RNY1P14-201ENST00000384426 108 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 RNU11-5P-201ENST00000391216 129 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
NEDD4P46934 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.54□□□□□ -2.16
NEDD4P46934 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 RPL26P26-201ENST00000480251 434 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 AC010409.1-201ENST00000487382 476 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.54□□□□□ -2.16
NEDD4P46934 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.54□□□□□ -2.16
NEDD4P46934 MIR4659A-201ENST00000580269 81 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 AC006157.1-201ENST00000611750 366 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 AC010205.1-201ENST00000616668 449 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
NEDD4P46934 MIR369-201ENST00000362155 70 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 SNORD114-7-201ENST00000362520 77 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 Y_RNA.128-201ENST00000363391 112 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 RNU6-271P-201ENST00000363858 105 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 RNU6-926P-201ENST00000384075 107 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 RNA5SP323-201ENST00000391094 133 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 MIR1302-11-201ENST00000408051 138 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 MIR1302-9-201ENST00000408365 138 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 MIR1302-10-201ENST00000408734 138 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.53□□□□□ -2.16
NEDD4P46934 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.53□□□□□ -2.16
NEDD4P46934 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.53□□□□□ -2.16
NEDD4P46934 RNU7-99P-201ENST00000516271 62 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NEDD4P46934 HSBP1P1-201ENST00000555205 166 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.53□□□□□ -2.16
NEDD4P46934 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
NEDD4P46934 MIR1302-2-201ENST00000607096 138 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 AC240442.1-201ENST00000616055 283 ntBASIC1.53□□□□□ -2.16
NEDD4P46934 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
NEDD4P46934 MTND4P29-201ENST00000503122 1372 ntBASIC1.53□□□□□ -2.17
NEDD4P46934 Y_RNA.11-201ENST00000362375 109 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 RNU6-626P-201ENST00000363354 107 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 RNU6-961P-201ENST00000363893 105 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 Y_RNA.230-201ENST00000364348 109 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 Y_RNA.243-201ENST00000364481 109 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 RNU6-708P-201ENST00000384217 107 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 SNORA20B-201ENST00000384220 132 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 RNU6-360P-201ENST00000390944 104 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 RNA5SP467-201ENST00000391274 118 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 FTH1P12-201ENST00000432137 551 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.52□□□□□ -2.17
NEDD4P46934 RPL36AP21-201ENST00000490372 323 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
NEDD4P46934 SNORA25.10-201ENST00000515926 124 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 Y_RNA.713-201ENST00000517013 96 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AP002001.1-203ENST00000534002 267 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AL121655.1-201ENST00000605811 308 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AC005828.6-201ENST00000606610 232 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 SNORD58B-201ENST00000607313 66 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 AC004467.1-201ENST00000615678 330 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 U6.115-201ENST00000636045 103 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 U6.92-201ENST00000636464 89 ntBASIC1.52□□□□□ -2.17
NEDD4P46934 Y_RNA.28-201ENST00000362554 111 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 RNU6-454P-201ENST00000364292 107 ntBASIC1.51□□□□□ -2.17
NEDD4P46934 Y_RNA.445-201ENST00000384168 102 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 264.8 ms