Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORD113-8-201ENST00000363497 74 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 RNU6-1248P-201ENST00000391096 64 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 RNU11-5P-201ENST00000391216 129 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 MIR1253-201ENST00000408273 105 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 RNU6-710P-201ENST00000410424 105 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-1P43699 DYNLT3P2-201ENST00000442517 295 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-1P43699 RPS26P45-201ENST00000471748 340 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 AC008413.1-201ENST00000511864 177 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.68□□□□□ -2.14
NKX2-1P43699 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-1P43699 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
NKX2-1P43699 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.68□□□□□ -2.14
NKX2-1P43699 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.68□□□□□ -2.14
NKX2-1P43699 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX2-1P43699 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NKX2-1P43699 RNA5SP289-201ENST00000362332 137 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 Y_RNA.64-201ENST00000362845 102 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU6-112P-201ENST00000363599 104 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 MIR568-201ENST00000385036 95 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 AL031003.1-201ENST00000404229 172 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU2-20P-201ENST00000410425 191 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU6-1203P-201ENST00000410703 110 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 EBAG9P1-201ENST00000418955 543 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
NKX2-1P43699 AL121890.1-201ENST00000435457 205 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-1P43699 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-1P43699 HMGB3P17-201ENST00000504195 649 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU7-99P-201ENST00000516271 62 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNY3P15-201ENST00000516297 97 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU6-966P-201ENST00000516479 104 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNA5SP281-201ENST00000516504 135 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 RNU6-635P-201ENST00000516651 102 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-1P43699 MIR5094-201ENST00000578766 85 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 MIR4672-201ENST00000583126 81 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 U6.104-201ENST00000637979 90 ntBASIC1.67□□□□□ -2.14
NKX2-1P43699 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX2-1P43699 Y_RNA.84-201ENST00000363011 104 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 RNU6-290P-201ENST00000365212 101 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 Y_RNA.331-201ENST00000365267 102 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 RNU6-117P-201ENST00000365415 107 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 MIR520A-201ENST00000384862 85 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NKX2-1P43699 HMGN2P19-201ENST00000425149 265 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 RNA5SP57-201ENST00000459463 123 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 RNU6-397P-201ENST00000516226 104 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 RNU7-110P-201ENST00000516891 62 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 AC008269.2-201ENST00000561915 1105 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-1P43699 AC006001.4-201ENST00000622243 395 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 U6.108-201ENST00000637764 58 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 AC010615.1-201ENST00000594254 1764 ntBASIC1.66□□□□□ -2.14
NKX2-1P43699 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX2-1P43699 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX2-1P43699 MTND5P6-201ENST00000422338 1798 ntBASIC1.65□□□□□ -2.14
NKX2-1P43699 Y_RNA.26-201ENST00000362539 101 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 Y_RNA.111-201ENST00000363248 100 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-1309P-201ENST00000363305 108 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 SNORA63D-201ENST00000364359 132 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-806P-201ENST00000365147 105 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 Y_RNA.368-201ENST00000365547 113 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-472P-201ENST00000384299 107 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-463P-201ENST00000384340 107 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-21P-201ENST00000384710 107 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU4-53P-201ENST00000410828 140 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX2-1P43699 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.65□□□□□ -2.15
NKX2-1P43699 MRPS10P1-201ENST00000448483 130 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RPL23AP42-201ENST00000471152 471 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RPS26P55-201ENST00000471178 356 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU6-155P-201ENST00000516347 100 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNA5SP481-201ENST00000516814 122 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 RNU7-128P-201ENST00000517247 62 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 AC023157.2-201ENST00000540596 141 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 MIR6852-201ENST00000621699 66 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 IGHVIII-44-202ENST00000636235 289 ntBASIC1.65□□□□□ -2.15
NKX2-1P43699 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
NKX2-1P43699 UBE2WP1-201ENST00000362030 340 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 RNU1-22P-201ENST00000363334 158 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 Y_RNA.286-201ENST00000364813 102 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 Y_RNA.376-201ENST00000365638 108 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 Y_RNA.383-201ENST00000383855 97 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 MIR1302-3-201ENST00000408128 138 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 RNA5SP489-201ENST00000410986 109 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AL135786.1-201ENST00000415892 214 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC024067.1-201ENST00000426199 223 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC245047.4-201ENST00000433189 144 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 MTATP8P1-201ENST00000467115 207 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC098869.1-201ENST00000481627 292 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC010409.1-201ENST00000487382 476 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 RNA5SP20-201ENST00000515976 84 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms