Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.84□□□□□ -2.54
HTTP42858 RNU6-28P-201ENST00000362378 107 ntBASIC-0.84□□□□□ -2.54
HTTP42858 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.84□□□□□ -2.54
HTTP42858 RNU6-137P-201ENST00000363680 108 ntBASIC-0.84□□□□□ -2.54
HTTP42858 SNORD116-23-201ENST00000384645 92 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC090844.1-201ENST00000422019 156 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AL031274.1-201ENST00000450334 232 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC007547.1-201ENST00000462177 490 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.84□□□□□ -2.54
HTTP42858 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.84□□□□□ -2.54
HTTP42858 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.84□□□□□ -2.54
HTTP42858 AC093809.1-201ENST00000509155 340 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.84□□□□□ -2.54
HTTP42858 AC144521.1-201ENST00000607148 956 ntBASIC-0.84□□□□□ -2.54
HTTP42858 MIR6854-201ENST00000614935 69 ntBASIC-0.84□□□□□ -2.54
HTTP42858 ZNF204P-201ENST00000416749 2397 ntBASIC-0.84□□□□□ -2.54
HTTP42858 RNU6-502P-201ENST00000362419 108 ntBASIC-0.84□□□□□ -2.54
HTTP42858 RNU4-15P-201ENST00000362613 141 ntBASIC-0.84□□□□□ -2.54
HTTP42858 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.84□□□□□ -2.54
HTTP42858 MIR19A-201ENST00000384878 82 ntBASIC-0.84□□□□□ -2.54
HTTP42858 MIR1253-201ENST00000408273 105 ntBASIC-0.84□□□□□ -2.54
HTTP42858 VN1R87P-201ENST00000596706 487 ntBASIC-0.84□□□□□ -2.54
HTTP42858 AC104073.3-201ENST00000610942 955 ntBASIC-0.84□□□□□ -2.54
HTTP42858 RNU6-490P-201ENST00000362985 107 ntBASIC-0.85□□□□□ -2.55
HTTP42858 RNU6-440P-201ENST00000390882 105 ntBASIC-0.85□□□□□ -2.55
HTTP42858 MIR548K-201ENST00000408406 116 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AL358934.1-201ENST00000432346 324 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AC074290.1-201ENST00000448883 135 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AC013470.1-201ENST00000453438 462 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.85□□□□□ -2.55
HTTP42858 AC104458.1-201ENST00000608243 463 ntBASIC-0.85□□□□□ -2.55
HTTP42858 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.85□□□□□ -2.55
HTTP42858 SNORA1B-201ENST00000362535 133 ntBASIC-0.85□□□□□ -2.55
HTTP42858 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.85□□□□□ -2.55
HTTP42858 RNU6-278P-201ENST00000390945 109 ntBASIC-0.85□□□□□ -2.55
HTTP42858 SNORD41.1-201ENST00000391000 69 ntBASIC-0.85□□□□□ -2.55
HTTP42858 MTND3P8-201ENST00000412909 339 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AL442663.2-201ENST00000554385 511 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AC079610.2-201ENST00000604818 690 ntBASIC-0.85□□□□□ -2.55
HTTP42858 MIR15A-201ENST00000607334 83 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AC124016.2-201ENST00000610058 665 ntBASIC-0.85□□□□□ -2.55
HTTP42858 AL136221.1-201ENST00000621449 509 ntBASIC-0.85□□□□□ -2.55
HTTP42858 uc_338.10-201ENST00000621872 182 ntBASIC-0.85□□□□□ -2.55
HTTP42858 MIR382-201ENST00000637119 76 ntBASIC-0.85□□□□□ -2.55
HTTP42858 SGO1P1-201ENST00000603525 1447 ntBASIC-0.85□□□□□ -2.55
HTTP42858 U3.4-201ENST00000363352 213 ntBASIC-0.86□□□□□ -2.55
HTTP42858 SNORD64-201ENST00000386683 67 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AL359634.1-202ENST00000404721 284 ntBASIC-0.86□□□□□ -2.55
HTTP42858 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 AL117339.3-201ENST00000418733 162 ntBASIC-0.86□□□□□ -2.55
HTTP42858 BX119904.4-201ENST00000424402 301 ntBASIC-0.86□□□□□ -2.55
HTTP42858 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AL360271.2-201ENST00000447710 161 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.86□□□□□ -2.55
HTTP42858 AF186996.7-201ENST00000492781 209 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AC091959.1-201ENST00000495857 238 ntBASIC-0.86□□□□□ -2.55
HTTP42858 snoU83B.1-201ENST00000517136 88 ntBASIC-0.86□□□□□ -2.55
HTTP42858 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 DEFB131E-201ENST00000532329 154 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.86□□□□□ -2.55
HTTP42858 DEFB131E-202ENST00000602581 683 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AC103705.1-201ENST00000619013 241 ntBASIC-0.86□□□□□ -2.55
HTTP42858 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.86□□□□□ -2.55
HTTP42858 SNORD14.1-201ENST00000365609 90 ntBASIC-0.86□□□□□ -2.55
HTTP42858 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.86□□□□□ -2.55
HTTP42858 RNU6-880P-201ENST00000384526 107 ntBASIC-0.86□□□□□ -2.55
HTTP42858 MIR516B1-201ENST00000385211 90 ntBASIC-0.86□□□□□ -2.55
HTTP42858 SNORD28B-201ENST00000390993 75 ntBASIC-0.86□□□□□ -2.55
HTTP42858 MTCO2P5-201ENST00000422621 426 ntBASIC-0.86□□□□□ -2.55
HTTP42858 MTND1P26-201ENST00000440488 538 ntBASIC-0.86□□□□□ -2.55
HTTP42858 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.86□□□□□ -2.55
HTTP42858 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 MIR548AR-201ENST00000582191 57 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AC087683.1-201ENST00000591187 441 ntBASIC-0.86□□□□□ -2.55
HTTP42858 Z94722.1-201ENST00000604328 474 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AC091912.2-201ENST00000624798 167 ntBASIC-0.86□□□□□ -2.55
HTTP42858 U4.7-201ENST00000638126 106 ntBASIC-0.86□□□□□ -2.55
HTTP42858 MIR136-201ENST00000385207 82 ntBASIC-0.86□□□□□ -2.55
HTTP42858 SNORD93-201ENST00000408813 74 ntBASIC-0.86□□□□□ -2.55
HTTP42858 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 AC092447.3-201ENST00000426027 686 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.86□□□□□ -2.55
HTTP42858 SUMO1P2-201ENST00000452524 304 ntBASIC-0.86□□□□□ -2.55
HTTP42858 snoU13.16-201ENST00000459350 104 ntBASIC-0.86□□□□□ -2.55
HTTP42858 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.86□□□□□ -2.55
HTTP42858 RNU7-156P-201ENST00000517214 74 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AP003733.2-201ENST00000529409 171 ntBASIC-0.86□□□□□ -2.55
HTTP42858 AP000942.4-201ENST00000604811 241 ntBASIC-0.86□□□□□ -2.55
HTTP42858 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.87□□□□□ -2.55
HTTP42858 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.87□□□□□ -2.55
HTTP42858 RNA5SP261-201ENST00000410536 106 ntBASIC-0.87□□□□□ -2.55
HTTP42858 snoU13.2-201ENST00000459201 104 ntBASIC-0.87□□□□□ -2.55
HTTP42858 uc_338.4-201ENST00000616635 176 ntBASIC-0.87□□□□□ -2.55
HTTP42858 AC005562.2-201ENST00000618264 111 ntBASIC-0.87□□□□□ -2.55
HTTP42858 MIR4251-201ENST00000635819 61 ntBASIC-0.87□□□□□ -2.55
HTTP42858 AC132825.6-201ENST00000638861 357 ntBASIC-0.87□□□□□ -2.55
HTTP42858 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms