Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-318P-201ENST00000384283 103 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 Y_RNA.557-201ENST00000384680 107 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 RNU6-541P-201ENST00000384709 110 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MIR329-1-201ENST00000385028 80 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TNFSF9P41273 RNU11-5P-201ENST00000391216 129 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 RNU6-192P-201ENST00000391253 100 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFSF9P41273 MTND3P8-201ENST00000412909 339 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MTND4P18-201ENST00000447010 465 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFSF9P41273 SNORD65B-201ENST00000459126 73 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 RPL39P38-201ENST00000467018 153 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFSF9P41273 RNU6-966P-201ENST00000516479 104 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 RNU6-165P-201ENST00000517170 99 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 AL590705.4-201ENST00000532209 134 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 AC055872.1-201ENST00000570978 278 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 AC060780.3-201ENST00000589464 80 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 AL390123.1-201ENST00000603216 237 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MIR1244-1-201ENST00000612829 85 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFSF9P41273 AC106754.2-201ENST00000623006 233 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MIR1244-3-201ENST00000635744 85 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MIR1244-2-201ENST00000636449 85 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 MIR1244-4-202ENST00000636813 85 ntBASIC0.89□□□□□ -2.27
TNFSF9P41273 CASC19-280ENST00000642102 1351 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 RNU6-454P-201ENST00000364292 107 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 Y_RNA.248-201ENST00000364501 109 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 RNU6-596P-201ENST00000365395 98 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 RNU6-342P-201ENST00000384521 104 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 FCF1P9-201ENST00000412546 282 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 EIF1P2-201ENST00000428233 350 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC245047.3-201ENST00000429428 127 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFSF9P41273 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFSF9P41273 AC093023.1-201ENST00000547375 507 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFSF9P41273 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TNFSF9P41273 AL021879.1-201ENST00000611756 288 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC093913.1-201ENST00000614178 329 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 MIR8054-201ENST00000620877 86 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 AC098679.4-201ENST00000624241 654 ntBASIC0.88□□□□□ -2.27
TNFSF9P41273 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TNFSF9P41273 Y_RNA.124-201ENST00000363339 93 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 Y_RNA.179-201ENST00000363844 90 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 Y_RNA.358-201ENST00000365491 99 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU6-245P-201ENST00000384020 107 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU6-793P-201ENST00000384233 104 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU6-440P-201ENST00000390882 105 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU7-87P-201ENST00000459343 62 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 AC093303.1-201ENST00000514549 295 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU7-175P-201ENST00000515915 61 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU6-107P-201ENST00000516643 102 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNA5SP54-201ENST00000516951 92 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNU1-54P-201ENST00000517181 120 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.87□□□□□ -2.27
TNFSF9P41273 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFSF9P41273 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
TNFSF9P41273 AC010999.1-201ENST00000611856 324 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 SNORD3E-202ENST00000627253 216 ntBASIC0.87□□□□□ -2.27
TNFSF9P41273 RNY1P16-201ENST00000363063 111 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 Y_RNA.160-201ENST00000363677 92 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RNU6-99P-201ENST00000364721 107 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RNU6-601P-201ENST00000384540 107 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 Y_RNA.573-201ENST00000384763 105 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 MT-TL1-201ENST00000386347 75 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RNA5SP118-201ENST00000410385 109 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AC009161.1-201ENST00000417306 376 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 MTND1P34-201ENST00000438556 671 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 FGF7P6-202ENST00000451282 293 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFSF9P41273 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.86□□□□□ -2.27
TNFSF9P41273 RNU6-1132P-201ENST00000459214 107 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RN7SKP49-201ENST00000516675 260 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 RNU6-1016P-201ENST00000516689 94 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AC105029.1-201ENST00000520250 669 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AC134698.4-201ENST00000523451 826 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 U6.73-201ENST00000619194 103 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.86□□□□□ -2.27
TNFSF9P41273 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TNFSF9P41273 Y_RNA.279-201ENST00000364763 95 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 SNORD81.2-201ENST00000365153 76 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.85□□□□□ -2.27
TNFSF9P41273 RNU6-708P-201ENST00000384217 107 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 RNU6-1145P-201ENST00000384246 107 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
TNFSF9P41273 SNORA75.4-201ENST00000391278 119 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms