Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 U6.92-201ENST00000636464 89 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCLP35914 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGCLP35914 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 Y_RNA.394-201ENST00000383942 103 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 RNU6-1310P-201ENST00000384153 107 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 SNORA20B-201ENST00000384220 132 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 RNU6-474P-201ENST00000384243 107 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 Y_RNA.498-201ENST00000384460 102 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HMGCLP35914 RNA5SP467-201ENST00000391274 118 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 Y_RNA.605-201ENST00000410577 105 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 RNU6-1199P-201ENST00000411249 104 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCLP35914 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCLP35914 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCLP35914 MTND4P19-201ENST00000446659 478 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGCLP35914 HMGN1P13-201ENST00000505795 138 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AL161670.1-201ENST00000554348 137 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AL160236.1-201ENST00000556317 195 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AC006600.1-201ENST00000572529 153 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGCLP35914 PRR13P7-201ENST00000605538 430 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 AC240442.1-201ENST00000616055 283 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
HMGCLP35914 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HMGCLP35914 SNORA27.1-201ENST00000362604 124 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 Y_RNA.39-201ENST00000362620 98 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 Y_RNA.230-201ENST00000364348 109 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 RNU6-117P-201ENST00000365415 107 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 MCFD2P1-201ENST00000417812 300 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGCLP35914 MTCYBP6-201ENST00000441810 138 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 MRPS10P1-201ENST00000448483 130 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 RNU7-169P-201ENST00000459456 61 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGCLP35914 AL137100.2-201ENST00000555786 315 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.38□□□□□ -2.19
HMGCLP35914 SNORA77B-201ENST00000578179 125 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 MIR4769-201ENST00000584126 77 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 AL359075.3-201ENST00000613288 217 ntBASIC1.38□□□□□ -2.19
HMGCLP35914 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
HMGCLP35914 Y_RNA.31-201ENST00000362574 102 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 Y_RNA.80-201ENST00000362996 102 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 RNU1-22P-201ENST00000363334 158 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 Y_RNA.128-201ENST00000363391 112 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 SNORD115-30-201ENST00000364117 82 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 Y_RNA.458-201ENST00000384240 102 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 Y_RNA.462-201ENST00000384268 102 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 MIR194-1-201ENST00000384892 85 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 RNU2-54P-201ENST00000410299 190 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AC096644.2-201ENST00000429278 159 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AL163195.1-201ENST00000496941 348 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 RNU6-408P-201ENST00000515910 100 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 RNA5SP481-201ENST00000516814 122 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 MIR4659A-201ENST00000580269 81 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AP000942.3-201ENST00000603702 160 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AC022217.4-201ENST00000604389 163 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AL121655.1-201ENST00000605811 308 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCLP35914 AC090971.5-201ENST00000621102 293 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AC090574.1-201ENST00000623186 233 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 AC134503.1-201ENST00000633048 54 ntBASIC1.37□□□□□ -2.19
HMGCLP35914 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGCLP35914 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGCLP35914 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGCLP35914 MIR369-201ENST00000362155 70 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 Y_RNA.28-201ENST00000362554 111 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 RNU6-1266P-201ENST00000362794 105 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 Y_RNA.101-201ENST00000363154 102 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 RNU4-76P-201ENST00000364509 141 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 SNORD63-201ENST00000384262 68 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 Y_RNA.645-201ENST00000391229 102 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 MIR873-201ENST00000401120 77 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 MIR1253-201ENST00000408273 105 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.36□□□□□ -2.19
HMGCLP35914 EBAG9P1-201ENST00000418955 543 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AL160004.2-201ENST00000432935 350 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AL606517.2-201ENST00000442855 241 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC097462.1-201ENST00000514125 324 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 RNU6-237P-201ENST00000515985 71 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC023442.1-201ENST00000531247 422 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGCLP35914 AL390123.1-201ENST00000603216 237 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC022441.3-201ENST00000605737 136 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC004467.1-201ENST00000615678 330 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 AC007485.1-201ENST00000616755 206 ntBASIC1.36□□□□□ -2.19
HMGCLP35914 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGCLP35914 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGCLP35914 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms