Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 U3.8-201ENST00000363675 217 ntBASIC2.06□□□□□ -2.08
KRT9P35527 Y_RNA.257-201ENST00000364596 102 ntBASIC2.06□□□□□ -2.08
KRT9P35527 Y_RNA.447-201ENST00000384184 113 ntBASIC2.06□□□□□ -2.08
KRT9P35527 RNU6-281P-201ENST00000384212 103 ntBASIC2.06□□□□□ -2.08
KRT9P35527 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRT9P35527 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRT9P35527 FCF1P4-201ENST00000448326 183 ntBASIC2.06□□□□□ -2.08
KRT9P35527 NDUFB4P10-201ENST00000452541 359 ntBASIC2.06□□□□□ -2.08
KRT9P35527 RNU6-1132P-201ENST00000459214 107 ntBASIC2.06□□□□□ -2.08
KRT9P35527 RNU7-87P-201ENST00000459343 62 ntBASIC2.06□□□□□ -2.08
KRT9P35527 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.06□□□□□ -2.08
KRT9P35527 RNU6-897P-201ENST00000517135 105 ntBASIC2.06□□□□□ -2.08
KRT9P35527 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.06□□□□□ -2.08
KRT9P35527 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.06□□□□□ -2.08
KRT9P35527 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
KRT9P35527 RAC1P9-201ENST00000604990 392 ntBASIC2.06□□□□□ -2.08
KRT9P35527 AC011373.1-201ENST00000607270 237 ntBASIC2.06□□□□□ -2.08
KRT9P35527 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.06□□□□□ -2.08
KRT9P35527 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
KRT9P35527 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRT9P35527 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KRT9P35527 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
KRT9P35527 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
KRT9P35527 Y_RNA.376-201ENST00000365638 108 ntBASIC2.05□□□□□ -2.08
KRT9P35527 RNU6-472P-201ENST00000384299 107 ntBASIC2.05□□□□□ -2.08
KRT9P35527 RNU6-296P-201ENST00000384608 107 ntBASIC2.05□□□□□ -2.08
KRT9P35527 Y_RNA.552-201ENST00000384665 112 ntBASIC2.05□□□□□ -2.08
KRT9P35527 RNA5SP213-201ENST00000391031 106 ntBASIC2.05□□□□□ -2.08
KRT9P35527 AC016909.1-201ENST00000415916 166 ntBASIC2.05□□□□□ -2.08
KRT9P35527 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.05□□□□□ -2.08
KRT9P35527 CST2P1-201ENST00000425770 87 ntBASIC2.05□□□□□ -2.08
KRT9P35527 AC245047.4-201ENST00000433189 144 ntBASIC2.05□□□□□ -2.08
KRT9P35527 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
KRT9P35527 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.05□□□□□ -2.08
KRT9P35527 AC093023.1-201ENST00000547375 507 ntBASIC2.05□□□□□ -2.08
KRT9P35527 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
KRT9P35527 Y_RNA.27-201ENST00000362540 103 ntBASIC2.04□□□□□ -2.08
KRT9P35527 Y_RNA.183-201ENST00000363882 113 ntBASIC2.04□□□□□ -2.08
KRT9P35527 SNORA20.1-201ENST00000364790 130 ntBASIC2.04□□□□□ -2.08
KRT9P35527 Y_RNA.350-201ENST00000365409 98 ntBASIC2.04□□□□□ -2.08
KRT9P35527 Y_RNA.358-201ENST00000365491 99 ntBASIC2.04□□□□□ -2.08
KRT9P35527 RNU6-708P-201ENST00000384217 107 ntBASIC2.04□□□□□ -2.08
KRT9P35527 MT-TW-201ENST00000387382 68 ntBASIC2.04□□□□□ -2.08
KRT9P35527 MT-TR-201ENST00000387439 65 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC019129.1-201ENST00000403786 261 ntBASIC2.04□□□□□ -2.08
KRT9P35527 EIF1P2-201ENST00000428233 350 ntBASIC2.04□□□□□ -2.08
KRT9P35527 HMGN2P34-201ENST00000437647 269 ntBASIC2.04□□□□□ -2.08
KRT9P35527 SNORD127-201ENST00000458892 86 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC108210.2-201ENST00000503681 201 ntBASIC2.04□□□□□ -2.08
KRT9P35527 RNU6-1146P-201ENST00000516282 102 ntBASIC2.04□□□□□ -2.08
KRT9P35527 Y_RNA.683-201ENST00000516508 93 ntBASIC2.04□□□□□ -2.08
KRT9P35527 MIR2355-201ENST00000517199 87 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.04□□□□□ -2.08
KRT9P35527 AP003733.2-201ENST00000529409 171 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC023157.2-201ENST00000540596 141 ntBASIC2.04□□□□□ -2.08
KRT9P35527 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.04□□□□□ -2.08
KRT9P35527 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.04□□□□□ -2.08
KRT9P35527 MTND5P35-201ENST00000557537 1720 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC015712.3-201ENST00000559380 164 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AC090617.3-201ENST00000573670 475 ntBASIC2.04□□□□□ -2.08
KRT9P35527 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
KRT9P35527 Y_RNA.26-201ENST00000362539 101 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
KRT9P35527 SNORA16.1-201ENST00000364597 132 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RNU6-806P-201ENST00000365147 105 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RNU6-1001P-201ENST00000411265 100 ntBASIC2.03□□□□□ -2.08
KRT9P35527 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.03□□□□□ -2.08
KRT9P35527 LINC01399-202ENST00000458450 244 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RPL39P38-201ENST00000467018 153 ntBASIC2.03□□□□□ -2.08
KRT9P35527 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
KRT9P35527 Y_RNA.713-201ENST00000517013 96 ntBASIC2.03□□□□□ -2.08
KRT9P35527 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
KRT9P35527 AC078938.1-201ENST00000620993 318 ntBASIC2.03□□□□□ -2.08
KRT9P35527 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.03□□□□□ -2.08
KRT9P35527 Y_RNA.14-201ENST00000362415 103 ntBASIC2.02□□□□□ -2.09
KRT9P35527 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.02□□□□□ -2.09
KRT9P35527 Y_RNA.439-201ENST00000384119 94 ntBASIC2.02□□□□□ -2.09
KRT9P35527 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
KRT9P35527 Y_RNA.483-201ENST00000384380 101 ntBASIC2.02□□□□□ -2.09
KRT9P35527 Y_RNA.515-201ENST00000384535 112 ntBASIC2.02□□□□□ -2.09
KRT9P35527 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
KRT9P35527 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
KRT9P35527 MIR1185-2-201ENST00000408687 86 ntBASIC2.02□□□□□ -2.09
KRT9P35527 AC008134.1-201ENST00000420943 193 ntBASIC2.02□□□□□ -2.09
KRT9P35527 RPEP5-201ENST00000441137 268 ntBASIC2.02□□□□□ -2.09
KRT9P35527 TRBVB-201ENST00000477100 408 ntBASIC2.02□□□□□ -2.09
KRT9P35527 RNU6-570P-201ENST00000517051 105 ntBASIC2.02□□□□□ -2.09
KRT9P35527 AL442163.3-201ENST00000554110 156 ntBASIC2.02□□□□□ -2.09
KRT9P35527 MIR3128-201ENST00000581957 66 ntBASIC2.02□□□□□ -2.09
KRT9P35527 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.02□□□□□ -2.09
KRT9P35527 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
KRT9P35527 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
KRT9P35527 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRT9P35527 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.01□□□□□ -2.09
KRT9P35527 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
KRT9P35527 SNORA33-201ENST00000363664 130 ntBASIC2.01□□□□□ -2.09
KRT9P35527 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms