Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU7-99P-201ENST00000516271 62 ntBASIC1.1□□□□□ -2.23
RFC4P35249 Y_RNA.683-201ENST00000516508 93 ntBASIC1.1□□□□□ -2.23
RFC4P35249 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AF235103.2-201ENST00000525753 346 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AC136932.1-201ENST00000574771 208 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AC022432.1-201ENST00000595739 310 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AC005014.2-201ENST00000607795 599 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AL021879.1-201ENST00000611756 288 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AC084782.3-201ENST00000612282 578 ntBASIC1.1□□□□□ -2.23
RFC4P35249 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
RFC4P35249 RNU6-874P-201ENST00000362390 105 ntBASIC1.09□□□□□ -2.23
RFC4P35249 RNU5F-3P-201ENST00000363767 117 ntBASIC1.09□□□□□ -2.23
RFC4P35249 RNU6-510P-201ENST00000391239 108 ntBASIC1.09□□□□□ -2.23
RFC4P35249 MRPL42P3-201ENST00000401492 326 ntBASIC1.09□□□□□ -2.23
RFC4P35249 Y_RNA.594-201ENST00000410373 140 ntBASIC1.09□□□□□ -2.23
RFC4P35249 RNU6-1050P-201ENST00000410388 107 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.09□□□□□ -2.23
RFC4P35249 AC004941.2-201ENST00000427009 228 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC4P35249 AL353997.1-201ENST00000432936 108 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.09□□□□□ -2.23
RFC4P35249 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC4P35249 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.09□□□□□ -2.23
RFC4P35249 RPS27P22-201ENST00000478056 241 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC4P35249 APOOP3-201ENST00000536787 586 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.09□□□□□ -2.23
RFC4P35249 MIR4438-201ENST00000585271 93 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AC125232.2-201ENST00000592457 143 ntBASIC1.09□□□□□ -2.23
RFC4P35249 AL390123.1-201ENST00000603216 237 ntBASIC1.09□□□□□ -2.23
RFC4P35249 RNU6-1123P-201ENST00000362347 106 ntBASIC1.08□□□□□ -2.24
RFC4P35249 Y_RNA.490-201ENST00000384413 102 ntBASIC1.08□□□□□ -2.24
RFC4P35249 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
RFC4P35249 SNORA12.1-201ENST00000390873 148 ntBASIC1.08□□□□□ -2.24
RFC4P35249 MIR190B-201ENST00000401119 79 ntBASIC1.08□□□□□ -2.24
RFC4P35249 MIR548K-201ENST00000408406 116 ntBASIC1.08□□□□□ -2.24
RFC4P35249 RN7SKP200-201ENST00000410564 320 ntBASIC1.08□□□□□ -2.24
RFC4P35249 MTND3P8-201ENST00000412909 339 ntBASIC1.08□□□□□ -2.24
RFC4P35249 U8.22-201ENST00000459141 133 ntBASIC1.08□□□□□ -2.24
RFC4P35249 RPL7P42-201ENST00000481005 679 ntBASIC1.08□□□□□ -2.24
RFC4P35249 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
RFC4P35249 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.08□□□□□ -2.24
RFC4P35249 DEFB108E-201ENST00000524692 240 ntBASIC1.08□□□□□ -2.24
RFC4P35249 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.08□□□□□ -2.24
RFC4P35249 MIR5701-3-201ENST00000578890 82 ntBASIC1.08□□□□□ -2.24
RFC4P35249 MIR5701-1-201ENST00000585138 82 ntBASIC1.08□□□□□ -2.24
RFC4P35249 AL357075.2-201ENST00000614906 189 ntBASIC1.08□□□□□ -2.24
RFC4P35249 MIR5701-2-201ENST00000615634 82 ntBASIC1.08□□□□□ -2.24
RFC4P35249 RNA5SP361-201ENST00000362686 118 ntBASIC1.07□□□□□ -2.24
RFC4P35249 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
RFC4P35249 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
RFC4P35249 RNU6-950P-201ENST00000384651 107 ntBASIC1.07□□□□□ -2.24
RFC4P35249 Y_RNA.557-201ENST00000384680 107 ntBASIC1.07□□□□□ -2.24
RFC4P35249 MIR193B-201ENST00000384907 83 ntBASIC1.07□□□□□ -2.24
RFC4P35249 MIR329-1-201ENST00000385028 80 ntBASIC1.07□□□□□ -2.24
RFC4P35249 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.07□□□□□ -2.24
RFC4P35249 AC074085.1-201ENST00000413598 418 ntBASIC1.07□□□□□ -2.24
RFC4P35249 EIF1P2-201ENST00000428233 350 ntBASIC1.07□□□□□ -2.24
RFC4P35249 MTND1P34-201ENST00000438556 671 ntBASIC1.07□□□□□ -2.24
RFC4P35249 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.07□□□□□ -2.24
RFC4P35249 RNU6-1016P-201ENST00000516689 94 ntBASIC1.07□□□□□ -2.24
RFC4P35249 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.07□□□□□ -2.24
RFC4P35249 AC090617.3-201ENST00000573670 475 ntBASIC1.07□□□□□ -2.24
RFC4P35249 AC068790.6-201ENST00000602558 258 ntBASIC1.07□□□□□ -2.24
RFC4P35249 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
RFC4P35249 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
RFC4P35249 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
RFC4P35249 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
RFC4P35249 AC106754.2-201ENST00000623006 233 ntBASIC1.07□□□□□ -2.24
RFC4P35249 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.07□□□□□ -2.24
RFC4P35249 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RFC4P35249 RNY1P16-201ENST00000363063 111 ntBASIC1.06□□□□□ -2.24
RFC4P35249 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
RFC4P35249 RNU6-879P-201ENST00000364328 108 ntBASIC1.06□□□□□ -2.24
RFC4P35249 Y_RNA.404-201ENST00000383978 102 ntBASIC1.06□□□□□ -2.24
RFC4P35249 SNORA20B-201ENST00000384220 132 ntBASIC1.06□□□□□ -2.24
RFC4P35249 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
RFC4P35249 RNU6-601P-201ENST00000384540 107 ntBASIC1.06□□□□□ -2.24
RFC4P35249 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
RFC4P35249 ELOCP21-201ENST00000412558 336 ntBASIC1.06□□□□□ -2.24
RFC4P35249 UQCRBP2-201ENST00000447827 297 ntBASIC1.06□□□□□ -2.24
RFC4P35249 MRPS10P1-201ENST00000448483 130 ntBASIC1.06□□□□□ -2.24
RFC4P35249 MTND3P10-201ENST00000450967 341 ntBASIC1.06□□□□□ -2.24
RFC4P35249 AC018710.1-201ENST00000506509 158 ntBASIC1.06□□□□□ -2.24
RFC4P35249 AC010598.1-201ENST00000510378 103 ntBASIC1.06□□□□□ -2.24
RFC4P35249 AC046134.1-201ENST00000514454 666 ntBASIC1.06□□□□□ -2.24
RFC4P35249 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
RFC4P35249 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.06□□□□□ -2.24
RFC4P35249 AL121579.1-201ENST00000555129 305 ntBASIC1.06□□□□□ -2.24
RFC4P35249 Y_RNA.339-201ENST00000365325 102 ntBASIC1.05□□□□□ -2.24
RFC4P35249 Y_RNA.364-201ENST00000365532 101 ntBASIC1.05□□□□□ -2.24
RFC4P35249 RNU6-700P-201ENST00000391043 107 ntBASIC1.05□□□□□ -2.24
RFC4P35249 MTND1P4-201ENST00000435196 415 ntBASIC1.05□□□□□ -2.24
RFC4P35249 STAG3L5P-204ENST00000443759 179 ntBASIC1.05□□□□□ -2.24
RFC4P35249 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
RFC4P35249 AC133485.1-201ENST00000567176 124 ntBASIC1.05□□□□□ -2.24
RFC4P35249 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.05□□□□□ -2.24
RFC4P35249 AC138907.6-201ENST00000568401 126 ntBASIC1.05□□□□□ -2.24
RFC4P35249 AC004584.2-201ENST00000570407 410 ntBASIC1.05□□□□□ -2.24
RFC4P35249 MIR1273G-201ENST00000577677 100 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms