Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 RPL7P42-201ENST00000481005 679 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 RNA5SP20-201ENST00000515976 84 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 RN7SKP49-201ENST00000516675 260 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 RNU6-341P-201ENST00000516973 96 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.19□□□□□ -2.22
CTNNA1P35221 AP002004.2-201ENST00000531656 154 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 MIR6715A-201ENST00000615929 79 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 AC104260.1-201ENST00000616660 539 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 PISRT1.1-201ENST00000616930 107 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 AC022306.2-201ENST00000617563 647 ntBASIC1.19□□□□□ -2.22
CTNNA1P35221 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTNNA1P35221 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTNNA1P35221 SNORA75.4-201ENST00000391278 119 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 Y_RNA.635-201ENST00000459041 101 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 RPL17P19-201ENST00000489069 552 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 OR9P1P-201ENST00000496431 281 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 RNU6-1278P-201ENST00000516130 107 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 MIR2355-201ENST00000517199 87 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.18□□□□□ -2.22
CTNNA1P35221 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNNA1P35221 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 AC092794.2-201ENST00000620933 563 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
CTNNA1P35221 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CTNNA1P35221 SNORA1B-201ENST00000362535 133 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 SNORA27.1-201ENST00000362604 124 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 Y_RNA.557-201ENST00000384680 107 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 MT-TL1-201ENST00000386347 75 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 RNU6-1054P-201ENST00000411293 104 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.17□□□□□ -2.22
CTNNA1P35221 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.17□□□□□ -2.22
CTNNA1P35221 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 RNU6-917P-201ENST00000516294 104 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 SCARNA16.2-201ENST00000516520 172 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 AC080078.3-201ENST00000605407 463 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 AL357075.2-201ENST00000614906 189 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 AL669831.3-213ENST00000636676 183 ntBASIC1.17□□□□□ -2.22
CTNNA1P35221 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CTNNA1P35221 RNA5SP361-201ENST00000362686 118 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 RNU6-879P-201ENST00000364328 108 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 SUMO1P2-201ENST00000452524 304 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 RPL39P39-201ENST00000455840 151 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.16□□□□□ -2.22
CTNNA1P35221 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 RNU6-1291P-201ENST00000516591 104 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.16□□□□□ -2.22
CTNNA1P35221 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.16□□□□□ -2.22
CTNNA1P35221 AC091178.2-201ENST00000584401 117 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 AC005828.6-201ENST00000606610 232 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 TPTEP1-208ENST00000636884 213 ntBASIC1.16□□□□□ -2.22
CTNNA1P35221 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CTNNA1P35221 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 RNA5SP482-201ENST00000391269 118 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA1P35221 PCNPP5-201ENST00000452246 481 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 U8.22-201ENST00000459141 133 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA1P35221 AC022493.2-201ENST00000506122 481 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 RNU7-12P-201ENST00000516030 62 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA1P35221 AC018448.1-201ENST00000552843 316 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 MIR4524B-201ENST00000581569 115 ntBASIC1.15□□□□□ -2.23
CTNNA1P35221 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
CTNNA1P35221 SNORD114-7-201ENST00000362520 77 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 SNORD81.2-201ENST00000365153 76 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 Y_RNA.358-201ENST00000365491 99 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.14□□□□□ -2.23
CTNNA1P35221 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 RNU6-876P-201ENST00000391295 104 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 SNORA75.6-201ENST00000391318 127 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 RNU4-14P-201ENST00000410858 122 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 AC092423.1-201ENST00000430165 186 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 AC093850.1-201ENST00000454121 251 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 AC082651.2-201ENST00000496833 166 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.14□□□□□ -2.23
CTNNA1P35221 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
CTNNA1P35221 MIR4298-201ENST00000584380 73 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 AC005592.1-201ENST00000566527 1640 ntBASIC1.14□□□□□ -2.23
CTNNA1P35221 MIR378A-201ENST00000362177 66 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 RNU6-1188P-201ENST00000363795 107 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 Y_RNA.498-201ENST00000384460 102 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 Y_RNA.577-201ENST00000384794 101 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 MIR873-201ENST00000401120 77 ntBASIC1.13□□□□□ -2.23
CTNNA1P35221 AL137792.2-201ENST00000443484 235 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms