Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RNU6-501P-201ENST00000364072 100 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 RNA5SP117-201ENST00000365294 118 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 SNORD114-12-201ENST00000365400 75 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.6□□□□□ -2.51
CKS2P33552 MLLT10P1-201ENST00000418346 262 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 GPR143P-201ENST00000434155 205 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.6□□□□□ -2.51
CKS2P33552 AC022878.1-201ENST00000530684 149 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.6□□□□□ -2.51
CKS2P33552 MIR499B-201ENST00000636498 73 ntBASIC-0.6□□□□□ -2.51
CKS2P33552 RNU6-161P-201ENST00000363051 106 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 RNU6-784P-201ENST00000384330 106 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 MIR1-2-201ENST00000384961 85 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 MTND4P32-201ENST00000437189 1237 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.61□□□□□ -2.51
CKS2P33552 SCOCP1-201ENST00000554676 349 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.61□□□□□ -2.51
CKS2P33552 AC100830.2-201ENST00000581636 240 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 AP000753.3-201ENST00000604083 169 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 AC018714.1-201ENST00000605028 208 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 RNU4-5P-201ENST00000607255 135 ntBASIC-0.61□□□□□ -2.51
CKS2P33552 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 SNORA26-201ENST00000391286 122 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.62□□□□□ -2.51
CKS2P33552 ZNF114P1-201ENST00000453500 292 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.62□□□□□ -2.51
CKS2P33552 MIR4264-201ENST00000583520 66 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 U2.17-201ENST00000611454 95 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 AC027807.2-201ENST00000616099 408 ntBASIC-0.62□□□□□ -2.51
CKS2P33552 AC121333.1-201ENST00000567488 2709 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 RNU4-9P-201ENST00000364951 139 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 RNU6-108P-201ENST00000365558 107 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 RNU6-125P-201ENST00000384505 107 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 RNU6-83P-201ENST00000384568 112 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 MTCO2P33-201ENST00000402100 465 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 SSR1P2-201ENST00000415208 787 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.63□□□□□ -2.51
CKS2P33552 USP9YP12-201ENST00000450481 570 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.63□□□□□ -2.51
CKS2P33552 SNORA14.1-201ENST00000516113 141 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 AC026371.1-201ENST00000551867 419 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.63□□□□□ -2.51
CKS2P33552 MIR1273G-201ENST00000577677 100 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 SNORD92-201ENST00000585078 85 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 AL158209.2-201ENST00000619266 216 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 AC127459.3-201ENST00000624328 466 ntBASIC-0.63□□□□□ -2.51
CKS2P33552 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNA5SP275-201ENST00000363936 118 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-364P-201ENST00000384387 107 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 MIR570-201ENST00000384917 97 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 MIR802-201ENST00000390235 94 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-447P-201ENST00000410293 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-355P-201ENST00000410427 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-791P-201ENST00000410467 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-705P-201ENST00000410601 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-860P-201ENST00000410860 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU2-72P-201ENST00000411175 163 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-785P-201ENST00000411324 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.64□□□□□ -2.51
CKS2P33552 SNORD45.4-201ENST00000516629 73 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 RNU6-448P-201ENST00000517052 107 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 AP000811.1-201ENST00000603803 651 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 AL670379.3-201ENST00000605040 251 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 uc_338.6-201ENST00000613544 171 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 U6.90-201ENST00000614007 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.64□□□□□ -2.51
CKS2P33552 U6.70-201ENST00000620287 104 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 AC067863.3-201ENST00000624172 122 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 SNORD38B-202ENST00000625943 69 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.64□□□□□ -2.51
CKS2P33552 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.64□□□□□ -2.51
CKS2P33552 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 RNU6-636P-201ENST00000384598 107 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 MIR125B2-201ENST00000385128 89 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 AC096531.1-201ENST00000419107 107 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 PDCL2P1-201ENST00000419302 352 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 RPL39P34-201ENST00000477141 156 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 AC116353.2-201ENST00000505332 712 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 SNORA18.4-201ENST00000516440 124 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.65□□□□□ -2.51
CKS2P33552 MIR5583-1-201ENST00000580941 59 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 MIR6828-201ENST00000636181 60 ntBASIC-0.65□□□□□ -2.51
CKS2P33552 RNU4-21P-201ENST00000362802 126 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 RNU6-716P-201ENST00000365621 103 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 RNU6-136P-201ENST00000384663 107 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 SNORA26.5-201ENST00000391215 123 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 RNA5SP163-201ENST00000410304 99 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.66□□□□□ -2.52
CKS2P33552 MTND1P17-201ENST00000448961 204 ntBASIC-0.66□□□□□ -2.52
CKS2P33552 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms