Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RN7SKP49-201ENST00000516675 260 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.16□□□□□ -2.22
PTPN6P29350 AC080078.2-201ENST00000603766 501 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.16□□□□□ -2.22
PTPN6P29350 U6atac.1-201ENST00000616025 117 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PTPN6P29350 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PTPN6P29350 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.15□□□□□ -2.22
PTPN6P29350 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
PTPN6P29350 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 Y_RNA.265-201ENST00000364677 108 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 Y_RNA.269-201ENST00000364685 89 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 RNU6-376P-201ENST00000384731 106 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 MIR562-201ENST00000384894 95 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 SNORA75.4-201ENST00000391278 119 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 MIR1276-201ENST00000408707 83 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 RNA5SP475-201ENST00000410568 110 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 AC018865.2-201ENST00000423631 129 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 FGF7P6-202ENST00000451282 293 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.15□□□□□ -2.23
PTPN6P29350 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 RPL17P19-201ENST00000489069 552 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 RNA5SP20-201ENST00000515976 84 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 RNU2-56P-201ENST00000516826 190 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.15□□□□□ -2.23
PTPN6P29350 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 AC106754.2-201ENST00000623006 233 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 AC091895.1-201ENST00000624494 256 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 CASC19-280ENST00000642102 1351 ntBASIC1.15□□□□□ -2.23
PTPN6P29350 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
PTPN6P29350 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PTPN6P29350 Y_RNA.160-201ENST00000363677 92 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 RNU4-76P-201ENST00000364509 141 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 Y_RNA.267-201ENST00000364679 109 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR660-201ENST00000385235 97 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.14□□□□□ -2.23
PTPN6P29350 AC091021.1-201ENST00000468051 388 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.14□□□□□ -2.23
PTPN6P29350 MTND4LP26-201ENST00000518144 282 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.14□□□□□ -2.23
PTPN6P29350 MIR1244-1-201ENST00000612829 85 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR6504-201ENST00000613520 61 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR1244-3-201ENST00000635744 85 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR1244-2-201ENST00000636449 85 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR3674-201ENST00000636576 68 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 MIR1244-4-202ENST00000636813 85 ntBASIC1.14□□□□□ -2.23
PTPN6P29350 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PTPN6P29350 SNORA27.1-201ENST00000362604 124 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 SNORA12.1-201ENST00000390873 148 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.13□□□□□ -2.23
PTPN6P29350 AC114482.1-201ENST00000418010 247 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 MIR2053-201ENST00000459295 91 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 AC092991.1-201ENST00000477176 376 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 SNORA40.9-201ENST00000515895 93 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
PTPN6P29350 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 AC098679.4-201ENST00000624241 654 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 AC068647.2-201ENST00000637380 353 ntBASIC1.13□□□□□ -2.23
PTPN6P29350 RNU6-845P-201ENST00000362578 103 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 Y_RNA.116-201ENST00000363292 103 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 Y_RNA.224-201ENST00000364308 111 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 RNU6-318P-201ENST00000384283 103 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 RNU6-505P-201ENST00000384427 107 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 Y_RNA.508-201ENST00000384502 114 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 RNU6-876P-201ENST00000391295 104 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 RAB28P5-201ENST00000427490 651 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 Y_RNA.635-201ENST00000459041 101 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 RNU6-1278P-201ENST00000516130 107 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 U6.115-201ENST00000636045 103 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 AL669831.3-213ENST00000636676 183 ntBASIC1.12□□□□□ -2.23
PTPN6P29350 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPN6P29350 MIR410-201ENST00000362222 80 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-99P-201ENST00000364721 107 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-1310P-201ENST00000384153 107 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 MIR518E-201ENST00000385252 88 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 SNORD12B-201ENST00000410433 91 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNA5SP168-201ENST00000516642 112 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-922P-201ENST00000516753 99 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU7-28P-201ENST00000516759 62 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-341P-201ENST00000516973 96 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-1213P-201ENST00000517075 94 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-264P-201ENST00000517134 104 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 MIR2355-201ENST00000517199 87 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 AL513534.2-201ENST00000603836 250 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 AC092794.1-201ENST00000612734 582 ntBASIC1.11□□□□□ -2.23
PTPN6P29350 RNU6-199P-201ENST00000362954 107 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 Y_RNA.279-201ENST00000364763 95 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 MIR873-201ENST00000401120 77 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 CALM2P4-201ENST00000430810 426 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
PTPN6P29350 AL137792.2-201ENST00000443484 235 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 SUMO1P2-201ENST00000452524 304 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 MTND4P17-201ENST00000470444 350 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
PTPN6P29350 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms