Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 MIR410-201ENST00000362222 80 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 RNU6-490P-201ENST00000362985 107 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 MTCO2P27-201ENST00000420740 428 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 MTND4P28-201ENST00000426217 387 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AC073910.1-201ENST00000445047 438 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN4P29074 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN4P29074 SNORD65B-201ENST00000459126 73 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 RPS26P45-201ENST00000471748 340 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AL163195.1-201ENST00000496941 348 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 SNORA40.9-201ENST00000515895 93 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN4P29074 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN4P29074 AP002001.1-203ENST00000534002 267 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.35□□□□□ -2.19
PTPN4P29074 AC018448.1-201ENST00000552843 316 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN4P29074 Y_RNA.804-201ENST00000615262 101 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AC084781.2-201ENST00000615568 161 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
PTPN4P29074 RNY3P11-201ENST00000364153 102 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 SNORD12B-201ENST00000410433 91 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.34□□□□□ -2.19
PTPN4P29074 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPN4P29074 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 RNU6-625P-201ENST00000459412 107 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 MTND3P22-201ENST00000510932 243 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 RNU7-128P-201ENST00000517247 62 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AC144568.1-201ENST00000520139 137 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.34□□□□□ -2.19
PTPN4P29074 RAB11AP2-201ENST00000545905 639 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 AL162424.1-201ENST00000602325 221 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 LARP7P1-201ENST00000605576 316 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 U6.73-201ENST00000619194 103 ntBASIC1.34□□□□□ -2.19
PTPN4P29074 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PTPN4P29074 AC091812.1-201ENST00000432235 1948 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 Y_RNA.58-201ENST00000362807 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 Y_RNA.154-201ENST00000363624 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RNY3P1-201ENST00000365085 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 Y_RNA.314-201ENST00000365114 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RNY3-201ENST00000365484 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 Y_RNA.498-201ENST00000384460 102 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 MIR562-201ENST00000384894 95 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RN7SKP200-201ENST00000410564 320 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AF228730.4-201ENST00000421457 183 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AC010154.1-201ENST00000425857 269 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RAB28P5-201ENST00000427490 651 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.33□□□□□ -2.2
PTPN4P29074 AC099799.1-201ENST00000439809 192 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RPS27P1-201ENST00000450552 247 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.33□□□□□ -2.2
PTPN4P29074 RNU7-34P-201ENST00000459394 64 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RNU7-169P-201ENST00000459456 61 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AC010598.1-201ENST00000510378 103 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RNU6-699P-201ENST00000517081 110 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.33□□□□□ -2.2
PTPN4P29074 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.33□□□□□ -2.2
PTPN4P29074 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 AC138305.3-201ENST00000624988 240 ntBASIC1.33□□□□□ -2.2
PTPN4P29074 RNU6-1115P-201ENST00000362490 106 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 SNORA4.2-201ENST00000365313 147 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 Y_RNA.463-201ENST00000384271 102 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 RNA5SP109-201ENST00000391010 116 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 MRPL35P1-201ENST00000404272 572 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AL355796.1-201ENST00000406706 323 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.32□□□□□ -2.2
PTPN4P29074 MTND4LP11-201ENST00000422184 280 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AC005002.2-201ENST00000438228 269 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AL606517.2-201ENST00000442855 241 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.32□□□□□ -2.2
PTPN4P29074 RNU7-99P-201ENST00000516271 62 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AL442163.3-201ENST00000554110 156 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AC015688.6-201ENST00000577737 104 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.32□□□□□ -2.2
PTPN4P29074 MIR4438-201ENST00000585271 93 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 MIR3674-201ENST00000636576 68 ntBASIC1.32□□□□□ -2.2
PTPN4P29074 RNU4-73P-201ENST00000363164 141 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 RNU6-454P-201ENST00000364292 107 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 SNORA20B-201ENST00000384220 132 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 RNY3P4-201ENST00000384428 101 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 RNU6-1186P-201ENST00000410429 97 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 Y_RNA.605-201ENST00000410577 105 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 AC236972.2-201ENST00000434979 310 ntBASIC1.31□□□□□ -2.2
PTPN4P29074 PGBD4P5-201ENST00000445958 426 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms