Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.78□□□□□ -1.8
VARSP26640 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
VARSP26640 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.81
VARSP26640 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
VARSP26640 MFSD8-236ENST00000641509 4050 ntBASIC3.77□□□□□ -1.81
VARSP26640 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.77□□□□□ -1.81
VARSP26640 SNORA71.3-201ENST00000362582 128 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU1-72P-201ENST00000362976 153 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU6-743P-201ENST00000364151 106 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNA5SP139-201ENST00000364340 117 ntBASIC3.77□□□□□ -1.81
VARSP26640 MIR483-201ENST00000385070 76 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU6-816P-201ENST00000390914 107 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU6-972P-201ENST00000391208 107 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU6-1268P-201ENST00000391214 107 ntBASIC3.77□□□□□ -1.81
VARSP26640 RNU6-1239P-201ENST00000391310 107 ntBASIC3.77□□□□□ -1.81
VARSP26640 MIR1255A-201ENST00000408338 113 ntBASIC3.77□□□□□ -1.81
VARSP26640 AC087685.1-201ENST00000587507 141 ntBASIC3.77□□□□□ -1.81
VARSP26640 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VARSP26640 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VARSP26640 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
VARSP26640 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
VARSP26640 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARSP26640 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VARSP26640 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VARSP26640 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARSP26640 RNU1-105P-201ENST00000363470 161 ntBASIC3.76□□□□□ -1.81
VARSP26640 RNA5SP387-201ENST00000364226 106 ntBASIC3.76□□□□□ -1.81
VARSP26640 RNY1P6-201ENST00000384193 109 ntBASIC3.76□□□□□ -1.81
VARSP26640 Y_RNA.466-201ENST00000384294 113 ntBASIC3.76□□□□□ -1.81
VARSP26640 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
VARSP26640 AL139247.1-201ENST00000422768 325 ntBASIC3.76□□□□□ -1.81
VARSP26640 AC244505.4-201ENST00000434905 287 ntBASIC3.76□□□□□ -1.81
VARSP26640 AC009238.1-201ENST00000442165 424 ntBASIC3.76□□□□□ -1.81
VARSP26640 SSXP5-201ENST00000443473 287 ntBASIC3.76□□□□□ -1.81
VARSP26640 AC009237.6-201ENST00000446969 424 ntBASIC3.76□□□□□ -1.81
VARSP26640 AC022137.1-201ENST00000483735 151 ntBASIC3.76□□□□□ -1.81
VARSP26640 RNU7-99P-201ENST00000516271 62 ntBASIC3.76□□□□□ -1.81
VARSP26640 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.76□□□□□ -1.81
VARSP26640 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VARSP26640 AC018630.2-201ENST00000534866 2403 ntBASIC3.76□□□□□ -1.81
VARSP26640 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VARSP26640 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VARSP26640 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
VARSP26640 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VARSP26640 MAPK10-322ENST00000641485 4530 ntBASIC3.76□□□□□ -1.81
VARSP26640 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.75□□□□□ -1.81
VARSP26640 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VARSP26640 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VARSP26640 RNU1-133P-201ENST00000364867 167 ntBASIC3.75□□□□□ -1.81
VARSP26640 RNA5SP97-201ENST00000365006 84 ntBASIC3.75□□□□□ -1.81
VARSP26640 MIR1912-201ENST00000410389 80 ntBASIC3.75□□□□□ -1.81
VARSP26640 AC060773.1-201ENST00000421698 310 ntBASIC3.75□□□□□ -1.81
VARSP26640 AC010401.1-201ENST00000463867 348 ntBASIC3.75□□□□□ -1.81
VARSP26640 RPL23AP67-201ENST00000465341 474 ntBASIC3.75□□□□□ -1.81
VARSP26640 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.75□□□□□ -1.81
VARSP26640 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.75□□□□□ -1.81
VARSP26640 AL359075.3-201ENST00000613288 217 ntBASIC3.75□□□□□ -1.81
VARSP26640 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.75□□□□□ -1.81
VARSP26640 IGLL4P-201ENST00000614590 133 ntBASIC3.75□□□□□ -1.81
VARSP26640 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VARSP26640 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.75□□□□□ -1.81
VARSP26640 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.75□□□□□ -1.81
VARSP26640 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VARSP26640 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.75□□□□□ -1.81
VARSP26640 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VARSP26640 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.74□□□□□ -1.81
VARSP26640 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VARSP26640 RNY1P1-201ENST00000364372 112 ntBASIC3.74□□□□□ -1.81
VARSP26640 Y_RNA.290-201ENST00000364879 114 ntBASIC3.74□□□□□ -1.81
VARSP26640 RNU6-813P-201ENST00000384691 107 ntBASIC3.74□□□□□ -1.81
VARSP26640 RNU11-5P-201ENST00000391216 129 ntBASIC3.74□□□□□ -1.81
VARSP26640 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VARSP26640 GOT2P5-201ENST00000433995 546 ntBASIC3.74□□□□□ -1.81
VARSP26640 RNA5SP57-201ENST00000459463 123 ntBASIC3.74□□□□□ -1.81
VARSP26640 PHBP14-201ENST00000512887 367 ntBASIC3.74□□□□□ -1.81
VARSP26640 SCARNA17.1-201ENST00000516211 143 ntBASIC3.74□□□□□ -1.81
VARSP26640 SCARNA17.2-201ENST00000516334 143 ntBASIC3.74□□□□□ -1.81
VARSP26640 RNU7-6P-201ENST00000516845 62 ntBASIC3.74□□□□□ -1.81
VARSP26640 RNU6-856P-201ENST00000516959 98 ntBASIC3.74□□□□□ -1.81
VARSP26640 AC091564.4-201ENST00000533934 2194 ntBASIC3.74□□□□□ -1.81
VARSP26640 AC007229.1-201ENST00000590455 412 ntBASIC3.74□□□□□ -1.81
VARSP26640 SCARNA17.4-201ENST00000614296 143 ntBASIC3.74□□□□□ -1.81
VARSP26640 MIR6079-201ENST00000635807 62 ntBASIC3.74□□□□□ -1.81
VARSP26640 MIR3202-2-201ENST00000635980 79 ntBASIC3.74□□□□□ -1.81
VARSP26640 AC012442.3-202ENST00000636742 206 ntBASIC3.74□□□□□ -1.81
VARSP26640 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VARSP26640 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VARSP26640 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
VARSP26640 GABRG2-229ENST00000641017 3628 ntBASIC3.73□□□□□ -1.81
VARSP26640 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
VARSP26640 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.73□□□□□ -1.81
VARSP26640 MIR208A-201ENST00000362287 71 ntBASIC3.73□□□□□ -1.81
VARSP26640 RNU6-1083P-201ENST00000384022 107 ntBASIC3.73□□□□□ -1.81
VARSP26640 MIR34B-201ENST00000385076 84 ntBASIC3.73□□□□□ -1.81
VARSP26640 RPL39P39-201ENST00000455840 151 ntBASIC3.73□□□□□ -1.81
VARSP26640 RNU1-131P-201ENST00000458943 161 ntBASIC3.73□□□□□ -1.81
VARSP26640 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.73□□□□□ -1.81
VARSP26640 RNU7-25P-201ENST00000516544 62 ntBASIC3.73□□□□□ -1.81
VARSP26640 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms