Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC099677.2-201ENST00000436385 175 ntBASIC4.32□□□□□ -1.72
PTPREP23469 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPREP23469 SCARNA13-201ENST00000516672 275 ntBASIC4.32□□□□□ -1.72
PTPREP23469 MIR4778-201ENST00000577635 80 ntBASIC4.32□□□□□ -1.72
PTPREP23469 SNORA62.6-201ENST00000606322 83 ntBASIC4.32□□□□□ -1.72
PTPREP23469 AC064859.1-201ENST00000624741 174 ntBASIC4.32□□□□□ -1.72
PTPREP23469 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPREP23469 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPREP23469 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPREP23469 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPREP23469 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PTPREP23469 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPREP23469 Y_RNA.95-201ENST00000363079 95 ntBASIC4.31□□□□□ -1.72
PTPREP23469 SNORD38C-201ENST00000384381 69 ntBASIC4.31□□□□□ -1.72
PTPREP23469 RNY1P4-201ENST00000384595 115 ntBASIC4.31□□□□□ -1.72
PTPREP23469 AL353813.1-201ENST00000440700 253 ntBASIC4.31□□□□□ -1.72
PTPREP23469 RPL32P34-201ENST00000486380 400 ntBASIC4.31□□□□□ -1.72
PTPREP23469 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.31□□□□□ -1.72
PTPREP23469 AC006441.5-201ENST00000612680 209 ntBASIC4.31□□□□□ -1.72
PTPREP23469 U2.20-201ENST00000613956 192 ntBASIC4.31□□□□□ -1.72
PTPREP23469 AC091932.4-201ENST00000623386 200 ntBASIC4.31□□□□□ -1.72
PTPREP23469 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPREP23469 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPREP23469 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPREP23469 AC018630.2-201ENST00000534866 2403 ntBASIC4.3□□□□□ -1.72
PTPREP23469 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPREP23469 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPREP23469 Y_RNA.4-201ENST00000362333 112 ntBASIC4.3□□□□□ -1.72
PTPREP23469 Y_RNA.267-201ENST00000364679 109 ntBASIC4.3□□□□□ -1.72
PTPREP23469 Y_RNA.467-201ENST00000384297 102 ntBASIC4.3□□□□□ -1.72
PTPREP23469 Y_RNA.547-201ENST00000384654 119 ntBASIC4.3□□□□□ -1.72
PTPREP23469 MIR522-201ENST00000385071 87 ntBASIC4.3□□□□□ -1.72
PTPREP23469 AL445646.1-201ENST00000431784 216 ntBASIC4.3□□□□□ -1.72
PTPREP23469 FTH1P12-201ENST00000432137 551 ntBASIC4.3□□□□□ -1.72
PTPREP23469 RPS15AP28-201ENST00000435088 386 ntBASIC4.3□□□□□ -1.72
PTPREP23469 HMGN2P18-201ENST00000450680 270 ntBASIC4.3□□□□□ -1.72
PTPREP23469 RNU7-80P-201ENST00000459562 61 ntBASIC4.3□□□□□ -1.72
PTPREP23469 RPS23P4-201ENST00000487908 423 ntBASIC4.3□□□□□ -1.72
PTPREP23469 RNU1-61P-201ENST00000516107 151 ntBASIC4.3□□□□□ -1.72
PTPREP23469 SNORA18.7-201ENST00000516910 131 ntBASIC4.3□□□□□ -1.72
PTPREP23469 AC091544.4-201ENST00000555268 342 ntBASIC4.3□□□□□ -1.72
PTPREP23469 AC103810.1-201ENST00000579873 453 ntBASIC4.3□□□□□ -1.72
PTPREP23469 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPREP23469 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPREP23469 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPREP23469 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPREP23469 AC017071.1-201ENST00000564407 2204 ntBASIC4.3□□□□□ -1.72
PTPREP23469 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPREP23469 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PTPREP23469 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPREP23469 SNORD105B-201ENST00000458770 79 ntBASIC4.29□□□□□ -1.72
PTPREP23469 AP001486.1-201ENST00000463339 476 ntBASIC4.29□□□□□ -1.72
PTPREP23469 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPREP23469 AC002984.1-201ENST00000591692 448 ntBASIC4.29□□□□□ -1.72
PTPREP23469 AC095038.3-201ENST00000634439 195 ntBASIC4.29□□□□□ -1.72
PTPREP23469 AC244205.2-202ENST00000635781 342 ntBASIC4.29□□□□□ -1.72
PTPREP23469 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.29□□□□□ -1.72
PTPREP23469 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPREP23469 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPREP23469 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPREP23469 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPREP23469 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
PTPREP23469 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
PTPREP23469 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPREP23469 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 RNU6-743P-201ENST00000364151 106 ntBASIC4.28□□□□□ -1.72
PTPREP23469 MIR490-201ENST00000384865 128 ntBASIC4.28□□□□□ -1.72
PTPREP23469 RNA5SP239-201ENST00000410218 129 ntBASIC4.28□□□□□ -1.72
PTPREP23469 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPREP23469 HMGN2P34-201ENST00000437647 269 ntBASIC4.28□□□□□ -1.72
PTPREP23469 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPREP23469 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPREP23469 Y_RNA.659-201ENST00000515994 113 ntBASIC4.28□□□□□ -1.72
PTPREP23469 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.28□□□□□ -1.72
PTPREP23469 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPREP23469 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPREP23469 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PTPREP23469 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPREP23469 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPREP23469 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPREP23469 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPREP23469 RNU6-679P-201ENST00000391003 106 ntBASIC4.27□□□□□ -1.73
PTPREP23469 SNORA7.5-201ENST00000410672 110 ntBASIC4.27□□□□□ -1.73
PTPREP23469 RNU7-99P-201ENST00000516271 62 ntBASIC4.27□□□□□ -1.73
PTPREP23469 RNU2-58P-201ENST00000516403 183 ntBASIC4.27□□□□□ -1.73
PTPREP23469 RNU6-965P-201ENST00000516721 96 ntBASIC4.27□□□□□ -1.73
PTPREP23469 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPREP23469 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPREP23469 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPREP23469 MIR1248-201ENST00000629190 106 ntBASIC4.27□□□□□ -1.73
PTPREP23469 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPREP23469 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPREP23469 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPREP23469 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPREP23469 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPREP23469 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms