Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC008134.1-201ENST00000420943 193 ntBASIC2.63□□□□□ -1.99
XPAP23025 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
XPAP23025 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.63□□□□□ -1.99
XPAP23025 AP005660.1-201ENST00000522972 293 ntBASIC2.63□□□□□ -1.99
XPAP23025 NDUFA5P6-201ENST00000542110 379 ntBASIC2.63□□□□□ -1.99
XPAP23025 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
XPAP23025 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.15-201ENST00000611544 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.16-201ENST00000613119 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.12-201ENST00000613778 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.9-201ENST00000615427 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.11-201ENST00000616345 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.2-201ENST00000616535 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.3-201ENST00000617785 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.19-201ENST00000618602 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 RNU2-1-201ENST00000618664 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.6-201ENST00000619225 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.5-201ENST00000619465 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 U2.10-201ENST00000620268 191 ntBASIC2.63□□□□□ -1.99
XPAP23025 AC068647.2-201ENST00000637380 353 ntBASIC2.63□□□□□ -1.99
XPAP23025 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
XPAP23025 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
XPAP23025 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
XPAP23025 HSPE1P13-201ENST00000451143 297 ntBASIC2.62□□□□□ -1.99
XPAP23025 RPS27P22-201ENST00000478056 241 ntBASIC2.62□□□□□ -1.99
XPAP23025 AC117454.1-201ENST00000491120 168 ntBASIC2.62□□□□□ -1.99
XPAP23025 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.62□□□□□ -1.99
XPAP23025 SUMO2P18-201ENST00000518873 252 ntBASIC2.62□□□□□ -1.99
XPAP23025 AC100767.1-201ENST00000528178 123 ntBASIC2.62□□□□□ -1.99
XPAP23025 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.62□□□□□ -1.99
XPAP23025 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.62□□□□□ -1.99
XPAP23025 AC009487.4-201ENST00000624969 3585 ntBASIC2.62□□□□□ -1.99
XPAP23025 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
XPAP23025 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
XPAP23025 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
XPAP23025 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
XPAP23025 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
XPAP23025 RNU6-271P-201ENST00000363858 105 ntBASIC2.61□□□□□ -1.99
XPAP23025 Y_RNA.180-201ENST00000363867 113 ntBASIC2.61□□□□□ -1.99
XPAP23025 RNU6-899P-201ENST00000363947 107 ntBASIC2.61□□□□□ -1.99
XPAP23025 Y_RNA.233-201ENST00000364407 101 ntBASIC2.61□□□□□ -1.99
XPAP23025 RNU1-91P-201ENST00000364746 163 ntBASIC2.61□□□□□ -1.99
XPAP23025 RNU6-136P-201ENST00000384663 107 ntBASIC2.61□□□□□ -1.99
XPAP23025 RNA5SP511-201ENST00000410487 115 ntBASIC2.61□□□□□ -1.99
XPAP23025 SRIP3-201ENST00000413200 219 ntBASIC2.61□□□□□ -1.99
XPAP23025 HSPE1P21-201ENST00000438283 308 ntBASIC2.61□□□□□ -1.99
XPAP23025 SUMO1P3-201ENST00000439961 304 ntBASIC2.61□□□□□ -1.99
XPAP23025 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
XPAP23025 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
XPAP23025 Y_RNA.293-201ENST00000364908 93 ntBASIC2.6□□□□□ -1.99
XPAP23025 RNU6-117P-201ENST00000365415 107 ntBASIC2.6□□□□□ -1.99
XPAP23025 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
XPAP23025 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.6□□□□□ -1.99
XPAP23025 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.6□□□□□ -1.99
XPAP23025 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.6□□□□□ -1.99
XPAP23025 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.6□□□□□ -1.99
XPAP23025 RNU6-1219P-201ENST00000516143 112 ntBASIC2.6□□□□□ -1.99
XPAP23025 RNA5SP76-201ENST00000516277 87 ntBASIC2.6□□□□□ -1.99
XPAP23025 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
XPAP23025 AC072026.1-201ENST00000605023 201 ntBASIC2.6□□□□□ -1.99
XPAP23025 AL159152.1-201ENST00000635019 2587 ntBASIC2.6□□□□□ -1.99
XPAP23025 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.6□□□□□ -1.99
XPAP23025 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
XPAP23025 RNA5SP68-201ENST00000363885 119 ntBASIC2.59□□□□□ -1.99
XPAP23025 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.59□□□□□ -1.99
XPAP23025 RNU6-1062P-201ENST00000383908 107 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU1-148P-201ENST00000384472 162 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU6-417P-201ENST00000384712 107 ntBASIC2.59□□□□□ -1.99
XPAP23025 MIR518C-201ENST00000384822 101 ntBASIC2.59□□□□□ -1.99
XPAP23025 AL355497.1-201ENST00000406262 551 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU2-2P-201ENST00000410396 191 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
XPAP23025 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
XPAP23025 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
XPAP23025 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNA5SP282-201ENST00000516355 108 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU7-115P-201ENST00000516433 55 ntBASIC2.59□□□□□ -1.99
XPAP23025 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
XPAP23025 AC021269.2-201ENST00000532318 330 ntBASIC2.59□□□□□ -1.99
XPAP23025 AC015720.1-201ENST00000565251 277 ntBASIC2.59□□□□□ -1.99
XPAP23025 MIR4438-201ENST00000585271 93 ntBASIC2.59□□□□□ -1.99
XPAP23025 RNU2-4P-201ENST00000606190 192 ntBASIC2.59□□□□□ -1.99
XPAP23025 AL365434.2-201ENST00000607979 234 ntBASIC2.59□□□□□ -1.99
XPAP23025 AC006435.5-201ENST00000624486 112 ntBASIC2.59□□□□□ -1.99
XPAP23025 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
XPAP23025 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.59□□□□□ -2
XPAP23025 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
XPAP23025 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
XPAP23025 RNU1-22P-201ENST00000363334 158 ntBASIC2.58□□□□□ -2
XPAP23025 snoU2_19.4-201ENST00000364329 80 ntBASIC2.58□□□□□ -2
XPAP23025 RNU4-70P-201ENST00000384579 139 ntBASIC2.58□□□□□ -2
XPAP23025 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.58□□□□□ -2
XPAP23025 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.58□□□□□ -2
XPAP23025 RNA5SP148-201ENST00000516527 94 ntBASIC2.58□□□□□ -2
XPAP23025 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
XPAP23025 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
XPAP23025 MIR4513-201ENST00000581077 86 ntBASIC2.58□□□□□ -2
XPAP23025 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms