Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL355796.1-201ENST00000406706 323 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 SNORA70.12-201ENST00000516084 153 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 RNU6-911P-201ENST00000516523 104 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 RNU2-56P-201ENST00000516826 190 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 AL442163.3-201ENST00000554110 156 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
CAPN3P20807 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CAPN3P20807 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 Y_RNA.70-201ENST00000362886 110 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 Y_RNA.314-201ENST00000365114 102 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 RNU6-1283P-201ENST00000365314 105 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.66□□□□□ -2.14
CAPN3P20807 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 SNORA31.10-201ENST00000516482 106 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.66□□□□□ -2.14
CAPN3P20807 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 AC073349.3-201ENST00000617616 186 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 AC087588.2-201ENST00000617667 426 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 U6.115-201ENST00000636045 103 ntBASIC1.66□□□□□ -2.14
CAPN3P20807 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
CAPN3P20807 Y_RNA.224-201ENST00000364308 111 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 RNY3P4-201ENST00000384428 101 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 SNORD78.2-201ENST00000391076 69 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 RPS20P15-201ENST00000412792 311 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 ELOCP24-201ENST00000456370 334 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 AL161670.1-201ENST00000554348 137 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
CAPN3P20807 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.65□□□□□ -2.15
CAPN3P20807 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CAPN3P20807 MTND5P10-201ENST00000603719 1809 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 Y_RNA.265-201ENST00000364677 108 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 Y_RNA.390-201ENST00000383932 102 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 MIR520G-201ENST00000385064 90 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 RNY4P36-201ENST00000391116 96 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.64□□□□□ -2.15
CAPN3P20807 MTCO3P10-201ENST00000455912 772 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.64□□□□□ -2.15
CAPN3P20807 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 RNU6-408P-201ENST00000515910 100 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
CAPN3P20807 RAB11AP2-201ENST00000545905 639 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AL021879.1-201ENST00000611756 288 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AC127459.3-201ENST00000624328 466 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
CAPN3P20807 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CAPN3P20807 RNU6-1009P-201ENST00000390996 107 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.63□□□□□ -2.15
CAPN3P20807 AC236972.2-201ENST00000434979 310 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 STAG3L5P-204ENST00000443759 179 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 RPS29P23-201ENST00000458635 123 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AC105758.1-201ENST00000506038 399 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 RNU6-341P-201ENST00000516973 96 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AP002004.2-201ENST00000531656 154 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 MIR4801-201ENST00000582704 82 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AL390123.1-201ENST00000603216 237 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 MIR502-201ENST00000606349 86 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AC005828.6-201ENST00000606610 232 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 MIR6504-201ENST00000613520 61 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AL078604.3-201ENST00000615580 211 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 U2.1-201ENST00000618978 145 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
CAPN3P20807 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CAPN3P20807 RNU6-1040P-201ENST00000383974 107 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RNU6-1304P-201ENST00000411374 106 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RPL30P13-201ENST00000418873 348 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RPS27P16-201ENST00000425758 201 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.62□□□□□ -2.15
CAPN3P20807 AL137792.2-201ENST00000443484 235 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RNU7-169P-201ENST00000459456 61 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.62□□□□□ -2.15
CAPN3P20807 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
CAPN3P20807 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 AL132765.2-201ENST00000610812 351 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 SNORD3E-202ENST00000627253 216 ntBASIC1.62□□□□□ -2.15
CAPN3P20807 Y_RNA.243-201ENST00000364481 109 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 Y_RNA.428-201ENST00000384078 102 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 MIR7-2-201ENST00000384970 110 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 AL135790.2-201ENST00000437701 267 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 RNU6-277P-201ENST00000516272 106 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 SNORA4-201ENST00000584302 138 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 AL365434.2-201ENST00000607979 234 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 AL138825.1-201ENST00000618587 192 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 MTND4LP32-201ENST00000636111 270 ntBASIC1.61□□□□□ -2.15
CAPN3P20807 RNU6-42P-201ENST00000384165 107 ntBASIC1.6□□□□□ -2.15
CAPN3P20807 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
CAPN3P20807 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.6□□□□□ -2.15
CAPN3P20807 RNU6-120P-201ENST00000516077 103 ntBASIC1.6□□□□□ -2.15
CAPN3P20807 Y_RNA.718-201ENST00000517110 102 ntBASIC1.6□□□□□ -2.15
CAPN3P20807 PRR13P7-201ENST00000605538 430 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms