Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORD14A-201ENST00000606526 91 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AL359075.3-201ENST00000613288 217 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC3P19447 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC3P19447 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC3P19447 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC3P19447 U8.7-201ENST00000364940 136 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 MIR597-201ENST00000384968 97 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 RNU6-493P-201ENST00000391321 108 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 Y_RNA.621-201ENST00000411065 96 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 AC104332.1-201ENST00000440471 797 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 RPS27AP9-201ENST00000477681 438 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 RPL23AP54-201ENST00000495129 419 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 HMGB3P3-201ENST00000510526 400 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC3P19447 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC3P19447 MIR548AY-201ENST00000617669 107 ntBASIC3.25□□□□□ -1.89
ERCC3P19447 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC3P19447 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
ERCC3P19447 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ERCC3P19447 RNU1-112P-201ENST00000364401 164 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 SNORA8-201ENST00000384574 139 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 SNORA11.4-201ENST00000408823 129 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.24□□□□□ -1.89
ERCC3P19447 RNA5SP137-201ENST00000516833 135 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 RNU6-182P-201ENST00000516970 105 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 SNORA81.3-201ENST00000517283 198 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 MIR3169-201ENST00000578032 83 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 AL078604.3-201ENST00000615580 211 ntBASIC3.24□□□□□ -1.89
ERCC3P19447 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.24□□□□□ -1.89
ERCC3P19447 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERCC3P19447 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERCC3P19447 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
ERCC3P19447 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ERCC3P19447 RNU4-10P-201ENST00000364383 140 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 SNORA67.1-201ENST00000364749 141 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 AL138827.1-201ENST00000402666 306 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 AL135786.1-201ENST00000415892 214 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERCC3P19447 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.23□□□□□ -1.89
ERCC3P19447 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.23□□□□□ -1.89
ERCC3P19447 Y_RNA.644-201ENST00000459006 113 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 AP004217.1-201ENST00000480579 346 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.23□□□□□ -1.89
ERCC3P19447 Y_RNA.674-201ENST00000516362 113 ntBASIC3.23□□□□□ -1.89
ERCC3P19447 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.23□□□□□ -1.89
ERCC3P19447 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.23□□□□□ -1.89
ERCC3P19447 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERCC3P19447 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.23□□□□□ -1.89
ERCC3P19447 Y_RNA.29-201ENST00000362570 113 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 SNORA33-201ENST00000363664 130 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.22□□□□□ -1.89
ERCC3P19447 AC233266.1-201ENST00000454518 96 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 RN7SKP43-201ENST00000516173 320 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 AC015720.1-201ENST00000565251 277 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 AC242852.1-201ENST00000612151 96 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 AC244015.1-201ENST00000622301 99 ntBASIC3.22□□□□□ -1.89
ERCC3P19447 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.22□□□□□ -1.89
ERCC3P19447 RNU6-1020P-201ENST00000363684 107 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 MIR9-1-201ENST00000385198 89 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 MIR524-201ENST00000385242 87 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 COX6CP14-201ENST00000469580 174 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 RNU7-99P-201ENST00000516271 62 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 RNU7-115P-201ENST00000516433 55 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.21□□□□□ -1.9
ERCC3P19447 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.21□□□□□ -1.9
ERCC3P19447 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ERCC3P19447 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 RNU6-859P-201ENST00000362728 107 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 Y_RNA.304-201ENST00000365011 112 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 RNU1-52P-201ENST00000384190 164 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 SNORA36B-201ENST00000410438 131 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 PIGPP3-201ENST00000425307 415 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 AL162725.1-201ENST00000435405 301 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 RNU7-116P-201ENST00000516940 62 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 AP002392.1-201ENST00000537692 208 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 MIR4435-1-201ENST00000582552 80 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 Z83818.1-201ENST00000603584 150 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 AL353149.1-201ENST00000610667 244 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 FO624990.1-201ENST00000636373 85 ntBASIC3.2□□□□□ -1.9
ERCC3P19447 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC3P19447 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.2□□□□□ -1.9
ERCC3P19447 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ERCC3P19447 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC3P19447 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ERCC3P19447 MIR367-201ENST00000362299 68 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 Y_RNA.267-201ENST00000364679 109 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 RNU6-117P-201ENST00000365415 107 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 MIR518A2-201ENST00000384966 87 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 MT-TR-201ENST00000387439 65 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 RNU11-5P-201ENST00000391216 129 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 HMGN2P3-201ENST00000433603 273 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 HMGN2P5-201ENST00000436882 273 ntBASIC3.19□□□□□ -1.9
ERCC3P19447 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.19□□□□□ -1.9
ERCC3P19447 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC3P19447 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms