Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
VCLP18206 RNU6-376P-201ENST00000384731 106 ntBASIC1.27□□□□□ -2.21
VCLP18206 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.27□□□□□ -2.21
VCLP18206 AC018865.2-201ENST00000423631 129 ntBASIC1.27□□□□□ -2.21
VCLP18206 SUMO1P2-201ENST00000452524 304 ntBASIC1.27□□□□□ -2.21
VCLP18206 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.27□□□□□ -2.21
VCLP18206 RNU6-1278P-201ENST00000516130 107 ntBASIC1.27□□□□□ -2.21
VCLP18206 RNU7-28P-201ENST00000516759 62 ntBASIC1.27□□□□□ -2.21
VCLP18206 RNU2-56P-201ENST00000516826 190 ntBASIC1.27□□□□□ -2.21
VCLP18206 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.27□□□□□ -2.21
VCLP18206 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.27□□□□□ -2.21
VCLP18206 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
VCLP18206 AL359821.1-201ENST00000605519 182 ntBASIC1.27□□□□□ -2.21
VCLP18206 AL669831.3-213ENST00000636676 183 ntBASIC1.27□□□□□ -2.21
VCLP18206 RNU4-76P-201ENST00000364509 141 ntBASIC1.26□□□□□ -2.21
VCLP18206 RNU6-99P-201ENST00000364721 107 ntBASIC1.26□□□□□ -2.21
VCLP18206 MIR625-201ENST00000385047 85 ntBASIC1.26□□□□□ -2.21
VCLP18206 MIR660-201ENST00000385235 97 ntBASIC1.26□□□□□ -2.21
VCLP18206 MT-TL1-201ENST00000386347 75 ntBASIC1.26□□□□□ -2.21
VCLP18206 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
VCLP18206 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.26□□□□□ -2.21
VCLP18206 SNORA40.9-201ENST00000515895 93 ntBASIC1.26□□□□□ -2.21
VCLP18206 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
VCLP18206 Y_RNA.691-201ENST00000516611 103 ntBASIC1.26□□□□□ -2.21
VCLP18206 MIR5690-201ENST00000583739 73 ntBASIC1.26□□□□□ -2.21
VCLP18206 U6.115-201ENST00000636045 103 ntBASIC1.26□□□□□ -2.21
VCLP18206 Y_RNA.267-201ENST00000364679 109 ntBASIC1.25□□□□□ -2.21
VCLP18206 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
VCLP18206 RNU6-318P-201ENST00000384283 103 ntBASIC1.25□□□□□ -2.21
VCLP18206 SNORD12B-201ENST00000410433 91 ntBASIC1.25□□□□□ -2.21
VCLP18206 RAB28P5-201ENST00000427490 651 ntBASIC1.25□□□□□ -2.21
VCLP18206 MTND1P2-201ENST00000430604 821 ntBASIC1.25□□□□□ -2.21
VCLP18206 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.25□□□□□ -2.21
VCLP18206 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.25□□□□□ -2.21
VCLP18206 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
VCLP18206 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
VCLP18206 RNU6-341P-201ENST00000516973 96 ntBASIC1.25□□□□□ -2.21
VCLP18206 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
VCLP18206 AL513534.2-201ENST00000603836 250 ntBASIC1.25□□□□□ -2.21
VCLP18206 AC080078.3-201ENST00000605407 463 ntBASIC1.25□□□□□ -2.21
VCLP18206 AL050343.2-201ENST00000607338 280 ntBASIC1.25□□□□□ -2.21
VCLP18206 TPTEP1-208ENST00000636884 213 ntBASIC1.25□□□□□ -2.21
VCLP18206 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VCLP18206 MIR337-201ENST00000362281 93 ntBASIC1.24□□□□□ -2.21
VCLP18206 RNU6-1301P-201ENST00000362724 104 ntBASIC1.24□□□□□ -2.21
VCLP18206 Y_RNA.505-201ENST00000384489 102 ntBASIC1.24□□□□□ -2.21
VCLP18206 Y_RNA.577-201ENST00000384794 101 ntBASIC1.24□□□□□ -2.21
VCLP18206 SNORA69.1-201ENST00000390904 137 ntBASIC1.24□□□□□ -2.21
VCLP18206 MIR873-201ENST00000401120 77 ntBASIC1.24□□□□□ -2.21
VCLP18206 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.24□□□□□ -2.21
VCLP18206 AC091021.1-201ENST00000468051 388 ntBASIC1.24□□□□□ -2.21
VCLP18206 RNU6-1213P-201ENST00000517075 94 ntBASIC1.24□□□□□ -2.21
VCLP18206 AC106754.2-201ENST00000623006 233 ntBASIC1.24□□□□□ -2.21
VCLP18206 AC127459.3-201ENST00000624328 466 ntBASIC1.24□□□□□ -2.21
VCLP18206 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
VCLP18206 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
VCLP18206 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
VCLP18206 RNU6-370P-201ENST00000411008 104 ntBASIC1.23□□□□□ -2.21
VCLP18206 AL137792.2-201ENST00000443484 235 ntBASIC1.23□□□□□ -2.21
VCLP18206 MTND4P17-201ENST00000470444 350 ntBASIC1.23□□□□□ -2.21
VCLP18206 TRMT112P2-201ENST00000512910 132 ntBASIC1.23□□□□□ -2.21
VCLP18206 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
VCLP18206 AP002004.2-201ENST00000531656 154 ntBASIC1.23□□□□□ -2.21
VCLP18206 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.23□□□□□ -2.21
VCLP18206 RNU6-199P-201ENST00000362954 107 ntBASIC1.22□□□□□ -2.21
VCLP18206 SNORD81.2-201ENST00000365153 76 ntBASIC1.22□□□□□ -2.21
VCLP18206 RNU6-505P-201ENST00000384427 107 ntBASIC1.22□□□□□ -2.21
VCLP18206 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
VCLP18206 RNU6-1156P-201ENST00000410365 100 ntBASIC1.22□□□□□ -2.21
VCLP18206 Y_RNA.599-201ENST00000410489 109 ntBASIC1.22□□□□□ -2.21
VCLP18206 RNU4-14P-201ENST00000410858 122 ntBASIC1.22□□□□□ -2.21
VCLP18206 PDCL2P1-201ENST00000419302 352 ntBASIC1.22□□□□□ -2.21
VCLP18206 MTND4P28-201ENST00000426217 387 ntBASIC1.22□□□□□ -2.21
VCLP18206 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
VCLP18206 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.22□□□□□ -2.21
VCLP18206 RNA5SP168-201ENST00000516642 112 ntBASIC1.22□□□□□ -2.21
VCLP18206 AC144568.1-201ENST00000520139 137 ntBASIC1.22□□□□□ -2.21
VCLP18206 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.22□□□□□ -2.21
VCLP18206 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
VCLP18206 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
VCLP18206 AC022306.2-201ENST00000617563 647 ntBASIC1.22□□□□□ -2.21
VCLP18206 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
VCLP18206 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
VCLP18206 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VCLP18206 SNORD114-7-201ENST00000362520 77 ntBASIC1.21□□□□□ -2.22
VCLP18206 RNU6-454P-201ENST00000364292 107 ntBASIC1.21□□□□□ -2.22
VCLP18206 MIR520G-201ENST00000385064 90 ntBASIC1.21□□□□□ -2.22
VCLP18206 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
VCLP18206 RNA5SP482-201ENST00000391269 118 ntBASIC1.21□□□□□ -2.22
VCLP18206 SNORA75.6-201ENST00000391318 127 ntBASIC1.21□□□□□ -2.22
VCLP18206 RNU6-321P-201ENST00000410912 106 ntBASIC1.21□□□□□ -2.22
VCLP18206 AC022493.2-201ENST00000506122 481 ntBASIC1.21□□□□□ -2.22
VCLP18206 RNU7-4P-201ENST00000516961 62 ntBASIC1.21□□□□□ -2.22
VCLP18206 AC005828.6-201ENST00000606610 232 ntBASIC1.21□□□□□ -2.22
VCLP18206 AC068647.2-201ENST00000637380 353 ntBASIC1.21□□□□□ -2.22
VCLP18206 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VCLP18206 RNU6-1188P-201ENST00000363795 107 ntBASIC1.2□□□□□ -2.22
VCLP18206 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.2□□□□□ -2.22
VCLP18206 RNU6-424P-201ENST00000384367 105 ntBASIC1.2□□□□□ -2.22
VCLP18206 Y_RNA.646-201ENST00000410980 101 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms