Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 Y_RNA.106-201ENST00000363189 100 ntBASIC0.7□□□□□ -2.3
CD28P10747 SNORA2.2-201ENST00000365473 135 ntBASIC0.7□□□□□ -2.3
CD28P10747 MTCYBP4-201ENST00000401524 249 ntBASIC0.7□□□□□ -2.3
CD28P10747 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.7□□□□□ -2.3
CD28P10747 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
CD28P10747 AC074133.1-201ENST00000515696 183 ntBASIC0.7□□□□□ -2.3
CD28P10747 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
CD28P10747 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
CD28P10747 RNU6-917P-201ENST00000516294 104 ntBASIC0.7□□□□□ -2.3
CD28P10747 RNU7-172P-201ENST00000517125 64 ntBASIC0.7□□□□□ -2.3
CD28P10747 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
CD28P10747 RNU1-54P-201ENST00000517181 120 ntBASIC0.7□□□□□ -2.3
CD28P10747 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
CD28P10747 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
CD28P10747 MIR3662-201ENST00000637030 95 ntBASIC0.7□□□□□ -2.3
CD28P10747 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CD28P10747 SNORD114-7-201ENST00000362520 77 ntBASIC0.69□□□□□ -2.3
CD28P10747 RNU6-623P-201ENST00000363143 105 ntBASIC0.69□□□□□ -2.3
CD28P10747 Y_RNA.112-201ENST00000363250 102 ntBASIC0.69□□□□□ -2.3
CD28P10747 RNU6-117P-201ENST00000365415 107 ntBASIC0.69□□□□□ -2.3
CD28P10747 Y_RNA.361-201ENST00000365515 120 ntBASIC0.69□□□□□ -2.3
CD28P10747 Y_RNA.363-201ENST00000365529 113 ntBASIC0.69□□□□□ -2.3
CD28P10747 MIR613-201ENST00000385248 95 ntBASIC0.69□□□□□ -2.3
CD28P10747 U8.16-201ENST00000391279 133 ntBASIC0.69□□□□□ -2.3
CD28P10747 MIR190B-201ENST00000401119 79 ntBASIC0.69□□□□□ -2.3
CD28P10747 MTND4LP16-201ENST00000440828 295 ntBASIC0.69□□□□□ -2.3
CD28P10747 MTATP6P26-201ENST00000445926 662 ntBASIC0.69□□□□□ -2.3
CD28P10747 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.69□□□□□ -2.3
CD28P10747 AC048334.1-201ENST00000477975 159 ntBASIC0.69□□□□□ -2.3
CD28P10747 MTND5P5-201ENST00000503764 376 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
CD28P10747 UBL5P1-201ENST00000507979 193 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC026782.1-201ENST00000512952 449 ntBASIC0.69□□□□□ -2.3
CD28P10747 AL358944.1-201ENST00000528537 144 ntBASIC0.69□□□□□ -2.3
CD28P10747 AP002004.2-201ENST00000531656 154 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.69□□□□□ -2.3
CD28P10747 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.69□□□□□ -2.3
CD28P10747 MIR4778-201ENST00000577635 80 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC013244.2-201ENST00000603396 103 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC018462.2-201ENST00000605375 395 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC005014.2-201ENST00000607795 599 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC090517.2-201ENST00000614966 680 ntBASIC0.69□□□□□ -2.3
CD28P10747 AC106754.2-201ENST00000623006 233 ntBASIC0.69□□□□□ -2.3
CD28P10747 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.69□□□□□ -2.3
CD28P10747 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CD28P10747 MTND5P16-201ENST00000460269 1703 ntBASIC0.69□□□□□ -2.3
CD28P10747 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CD28P10747 Y_RNA.364-201ENST00000365532 101 ntBASIC0.68□□□□□ -2.3
CD28P10747 Y_RNA.436-201ENST00000384097 102 ntBASIC0.68□□□□□ -2.3
CD28P10747 Y_RNA.573-201ENST00000384763 105 ntBASIC0.68□□□□□ -2.3
CD28P10747 MIR598-201ENST00000384868 97 ntBASIC0.68□□□□□ -2.3
CD28P10747 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
CD28P10747 AC018865.2-201ENST00000423631 129 ntBASIC0.68□□□□□ -2.3
CD28P10747 AL137792.2-201ENST00000443484 235 ntBASIC0.68□□□□□ -2.3
CD28P10747 AC091021.1-201ENST00000468051 388 ntBASIC0.68□□□□□ -2.3
CD28P10747 AC018710.1-201ENST00000506509 158 ntBASIC0.68□□□□□ -2.3
CD28P10747 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.68□□□□□ -2.3
CD28P10747 RNA5SP20-201ENST00000515976 84 ntBASIC0.68□□□□□ -2.3
CD28P10747 Y_RNA.670-201ENST00000516255 105 ntBASIC0.68□□□□□ -2.3
CD28P10747 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
CD28P10747 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.68□□□□□ -2.3
CD28P10747 AC080078.2-201ENST00000603766 501 ntBASIC0.68□□□□□ -2.3
CD28P10747 AL357312.1-201ENST00000603879 298 ntBASIC0.68□□□□□ -2.3
CD28P10747 AL357075.2-201ENST00000614906 189 ntBASIC0.68□□□□□ -2.3
CD28P10747 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.68□□□□□ -2.3
CD28P10747 PVT1_3.1-201ENST00000620853 95 ntBASIC0.68□□□□□ -2.3
CD28P10747 MIR3688-2-201ENST00000636963 87 ntBASIC0.68□□□□□ -2.3
CD28P10747 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CD28P10747 RNU6-874P-201ENST00000362390 105 ntBASIC0.67□□□□□ -2.3
CD28P10747 SNORA1B-201ENST00000362535 133 ntBASIC0.67□□□□□ -2.3
CD28P10747 RNU6-593P-201ENST00000364716 112 ntBASIC0.67□□□□□ -2.3
CD28P10747 RNU6-1187P-201ENST00000364771 110 ntBASIC0.67□□□□□ -2.3
CD28P10747 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CD28P10747 RNA5SP482-201ENST00000391269 118 ntBASIC0.67□□□□□ -2.3
CD28P10747 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CD28P10747 AL451046.2-201ENST00000403074 277 ntBASIC0.67□□□□□ -2.3
CD28P10747 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.67□□□□□ -2.3
CD28P10747 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
CD28P10747 AL139396.1-201ENST00000421137 167 ntBASIC0.67□□□□□ -2.3
CD28P10747 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.67□□□□□ -2.3
CD28P10747 SUMO1P2-201ENST00000452524 304 ntBASIC0.67□□□□□ -2.3
CD28P10747 RPL39P28-201ENST00000465655 155 ntBASIC0.67□□□□□ -2.3
CD28P10747 RPS26P48-201ENST00000491713 339 ntBASIC0.67□□□□□ -2.3
CD28P10747 AC105313.1-201ENST00000509121 353 ntBASIC0.67□□□□□ -2.3
CD28P10747 RNU6-1016P-201ENST00000516689 94 ntBASIC0.67□□□□□ -2.3
CD28P10747 AP002001.1-203ENST00000534002 267 ntBASIC0.67□□□□□ -2.3
CD28P10747 RPL21P9-201ENST00000556149 474 ntBASIC0.67□□□□□ -2.3
CD28P10747 AC004832.4-201ENST00000608952 331 ntBASIC0.67□□□□□ -2.3
CD28P10747 MIR6128-201ENST00000615528 109 ntBASIC0.67□□□□□ -2.3
CD28P10747 AC100810.6-201ENST00000638068 285 ntBASIC0.67□□□□□ -2.3
CD28P10747 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.67□□□□□ -2.3
CD28P10747 AC073544.1-201ENST00000600110 1595 ntBASIC0.66□□□□□ -2.3
CD28P10747 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
CD28P10747 Y_RNA.3-201ENST00000362331 103 ntBASIC0.66□□□□□ -2.3
CD28P10747 Y_RNA.265-201ENST00000364677 108 ntBASIC0.66□□□□□ -2.3
CD28P10747 Y_RNA.295-201ENST00000364918 102 ntBASIC0.66□□□□□ -2.3
CD28P10747 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
CD28P10747 MIR873-201ENST00000401120 77 ntBASIC0.66□□□□□ -2.3
CD28P10747 MIR548K-201ENST00000408406 116 ntBASIC0.66□□□□□ -2.3
CD28P10747 AC063976.4-201ENST00000421971 163 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms