Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SNORD114-7-201ENST00000362520 77 ntBASIC1.85□□□□□ -2.11
CD48P09326 SNORA72.2-201ENST00000365028 127 ntBASIC1.85□□□□□ -2.11
CD48P09326 Y_RNA.361-201ENST00000365515 120 ntBASIC1.85□□□□□ -2.11
CD48P09326 Y_RNA.401-201ENST00000383965 117 ntBASIC1.85□□□□□ -2.11
CD48P09326 RNU6-1235P-201ENST00000384559 107 ntBASIC1.85□□□□□ -2.11
CD48P09326 Y_RNA.541-201ENST00000384640 113 ntBASIC1.85□□□□□ -2.11
CD48P09326 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.85□□□□□ -2.11
CD48P09326 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
CD48P09326 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
CD48P09326 AC005042.3-201ENST00000453230 174 ntBASIC1.85□□□□□ -2.11
CD48P09326 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
CD48P09326 RNU6-498P-201ENST00000459468 107 ntBASIC1.85□□□□□ -2.11
CD48P09326 RNU7-110P-201ENST00000516891 62 ntBASIC1.85□□□□□ -2.11
CD48P09326 AC023157.2-201ENST00000540596 141 ntBASIC1.85□□□□□ -2.11
CD48P09326 AC005828.6-201ENST00000606610 232 ntBASIC1.85□□□□□ -2.11
CD48P09326 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.85□□□□□ -2.11
CD48P09326 AC062037.2-201ENST00000610137 73 ntBASIC1.85□□□□□ -2.11
CD48P09326 snoZ196.1-201ENST00000625269 89 ntBASIC1.85□□□□□ -2.11
CD48P09326 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.85□□□□□ -2.11
CD48P09326 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CD48P09326 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CD48P09326 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CD48P09326 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CD48P09326 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CD48P09326 Y_RNA.286-201ENST00000364813 102 ntBASIC1.84□□□□□ -2.11
CD48P09326 Y_RNA.288-201ENST00000364854 92 ntBASIC1.84□□□□□ -2.11
CD48P09326 RNU6-290P-201ENST00000365212 101 ntBASIC1.84□□□□□ -2.11
CD48P09326 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
CD48P09326 Y_RNA.562-201ENST00000384695 113 ntBASIC1.84□□□□□ -2.11
CD48P09326 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
CD48P09326 RNU4-30P-201ENST00000410245 143 ntBASIC1.84□□□□□ -2.11
CD48P09326 Y_RNA.602-201ENST00000410535 92 ntBASIC1.84□□□□□ -2.11
CD48P09326 EDDM3CP-201ENST00000415977 425 ntBASIC1.84□□□□□ -2.11
CD48P09326 SUMO1P2-201ENST00000452524 304 ntBASIC1.84□□□□□ -2.11
CD48P09326 RNU7-26P-201ENST00000458980 63 ntBASIC1.84□□□□□ -2.11
CD48P09326 AC010531.2-201ENST00000465012 153 ntBASIC1.84□□□□□ -2.11
CD48P09326 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.84□□□□□ -2.11
CD48P09326 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
CD48P09326 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
CD48P09326 RNU6-966P-201ENST00000516479 104 ntBASIC1.84□□□□□ -2.11
CD48P09326 RNU6-570P-201ENST00000517051 105 ntBASIC1.84□□□□□ -2.11
CD48P09326 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
CD48P09326 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.84□□□□□ -2.12
CD48P09326 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CD48P09326 Y_RNA.99-201ENST00000363138 105 ntBASIC1.83□□□□□ -2.12
CD48P09326 Y_RNA.136-201ENST00000363444 102 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-743P-201ENST00000364151 106 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-326P-201ENST00000365480 107 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-102P-201ENST00000384485 104 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-21P-201ENST00000384710 107 ntBASIC1.83□□□□□ -2.12
CD48P09326 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.83□□□□□ -2.12
CD48P09326 RNU1-131P-201ENST00000458943 161 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-1132P-201ENST00000459214 107 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-436P-201ENST00000516171 114 ntBASIC1.83□□□□□ -2.12
CD48P09326 RNU6-1338P-201ENST00000516328 91 ntBASIC1.83□□□□□ -2.12
CD48P09326 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.83□□□□□ -2.12
CD48P09326 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.83□□□□□ -2.12
CD48P09326 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.83□□□□□ -2.12
CD48P09326 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
CD48P09326 AC006380.1-201ENST00000603598 186 ntBASIC1.83□□□□□ -2.12
CD48P09326 AC006001.4-201ENST00000622243 395 ntBASIC1.83□□□□□ -2.12
CD48P09326 U6.115-201ENST00000636045 103 ntBASIC1.83□□□□□ -2.12
CD48P09326 AL159152.1-201ENST00000635019 2587 ntBASIC1.83□□□□□ -2.12
CD48P09326 SNORD115-30-201ENST00000364117 82 ntBASIC1.82□□□□□ -2.12
CD48P09326 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
CD48P09326 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
CD48P09326 Y_RNA.618-201ENST00000410949 107 ntBASIC1.82□□□□□ -2.12
CD48P09326 AC016717.1-201ENST00000448918 286 ntBASIC1.82□□□□□ -2.12
CD48P09326 AL139109.1-201ENST00000455491 297 ntBASIC1.82□□□□□ -2.12
CD48P09326 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
CD48P09326 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
CD48P09326 AC025647.1-201ENST00000517879 253 ntBASIC1.82□□□□□ -2.12
CD48P09326 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
CD48P09326 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
CD48P09326 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CD48P09326 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CD48P09326 AL391987.6-201ENST00000305671 199 ntBASIC1.81□□□□□ -2.12
CD48P09326 Y_RNA.14-201ENST00000362415 103 ntBASIC1.81□□□□□ -2.12
CD48P09326 Y_RNA.237-201ENST00000364439 102 ntBASIC1.81□□□□□ -2.12
CD48P09326 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
CD48P09326 Y_RNA.569-201ENST00000384749 103 ntBASIC1.81□□□□□ -2.12
CD48P09326 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
CD48P09326 MIR1262-201ENST00000408276 93 ntBASIC1.81□□□□□ -2.12
CD48P09326 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.81□□□□□ -2.12
CD48P09326 MTND4LP30-201ENST00000454092 297 ntBASIC1.81□□□□□ -2.12
CD48P09326 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
CD48P09326 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.81□□□□□ -2.12
CD48P09326 AC010598.1-201ENST00000510378 103 ntBASIC1.81□□□□□ -2.12
CD48P09326 MTND1P19-201ENST00000511780 315 ntBASIC1.81□□□□□ -2.12
CD48P09326 SERF1AP1-201ENST00000514575 187 ntBASIC1.81□□□□□ -2.12
CD48P09326 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
CD48P09326 Y_RNA.680-201ENST00000516441 93 ntBASIC1.81□□□□□ -2.12
CD48P09326 RNU2-31P-201ENST00000516954 155 ntBASIC1.81□□□□□ -2.12
CD48P09326 RNU6-856P-201ENST00000516959 98 ntBASIC1.81□□□□□ -2.12
CD48P09326 AC006006.1-201ENST00000603082 144 ntBASIC1.81□□□□□ -2.12
CD48P09326 SDR42E1P4-201ENST00000620894 481 ntBASIC1.81□□□□□ -2.12
CD48P09326 AC012640.5-201ENST00000623897 319 ntBASIC1.81□□□□□ -2.12
CD48P09326 AC006435.5-201ENST00000624486 112 ntBASIC1.81□□□□□ -2.12
CD48P09326 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CD48P09326 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms