Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL390729.2-201ENST00000416137 156 ntBASIC1.95□□□□□ -2.1
MMP2P08253 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.95□□□□□ -2.1
MMP2P08253 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
MMP2P08253 AC005042.3-201ENST00000453230 174 ntBASIC1.95□□□□□ -2.1
MMP2P08253 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.95□□□□□ -2.1
MMP2P08253 AC025465.3-201ENST00000510570 311 ntBASIC1.95□□□□□ -2.1
MMP2P08253 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.95□□□□□ -2.1
MMP2P08253 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
MMP2P08253 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.95□□□□□ -2.1
MMP2P08253 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
MMP2P08253 PRR13P7-201ENST00000605538 430 ntBASIC1.95□□□□□ -2.1
MMP2P08253 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
MMP2P08253 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MMP2P08253 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MMP2P08253 Y_RNA.19-201ENST00000362462 99 ntBASIC1.94□□□□□ -2.1
MMP2P08253 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
MMP2P08253 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
MMP2P08253 RPL23AP36-201ENST00000413895 458 ntBASIC1.94□□□□□ -2.1
MMP2P08253 LINC01399-202ENST00000458450 244 ntBASIC1.94□□□□□ -2.1
MMP2P08253 RPS27P22-201ENST00000478056 241 ntBASIC1.94□□□□□ -2.1
MMP2P08253 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
MMP2P08253 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP2P08253 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
MMP2P08253 AL353149.1-201ENST00000610667 244 ntBASIC1.94□□□□□ -2.1
MMP2P08253 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MMP2P08253 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
MMP2P08253 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MMP2P08253 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
MMP2P08253 Y_RNA.64-201ENST00000362845 102 ntBASIC1.93□□□□□ -2.1
MMP2P08253 SNORD113-8-201ENST00000363497 74 ntBASIC1.93□□□□□ -2.1
MMP2P08253 RNU6-324P-201ENST00000363957 106 ntBASIC1.93□□□□□ -2.1
MMP2P08253 SNORD115-30-201ENST00000364117 82 ntBASIC1.93□□□□□ -2.1
MMP2P08253 MIR568-201ENST00000385036 95 ntBASIC1.93□□□□□ -2.1
MMP2P08253 SNORD115-46-201ENST00000390982 71 ntBASIC1.93□□□□□ -2.1
MMP2P08253 RNA5SP467-201ENST00000391274 118 ntBASIC1.93□□□□□ -2.1
MMP2P08253 Y_RNA.602-201ENST00000410535 92 ntBASIC1.93□□□□□ -2.1
MMP2P08253 RPL21P38-201ENST00000418090 167 ntBASIC1.93□□□□□ -2.1
MMP2P08253 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP2P08253 MTCYBP9-201ENST00000431021 303 ntBASIC1.93□□□□□ -2.1
MMP2P08253 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP2P08253 AC098869.1-201ENST00000481627 292 ntBASIC1.93□□□□□ -2.1
MMP2P08253 MTCO2P24-201ENST00000515611 426 ntBASIC1.93□□□□□ -2.1
MMP2P08253 RNU6-1143P-201ENST00000516125 104 ntBASIC1.93□□□□□ -2.1
MMP2P08253 RNVU1-2-201ENST00000516326 135 ntBASIC1.93□□□□□ -2.1
MMP2P08253 AC023157.2-201ENST00000540596 141 ntBASIC1.93□□□□□ -2.1
MMP2P08253 AL137100.2-201ENST00000555786 315 ntBASIC1.93□□□□□ -2.1
MMP2P08253 MIR5094-201ENST00000578766 85 ntBASIC1.93□□□□□ -2.1
MMP2P08253 AC005828.6-201ENST00000606610 232 ntBASIC1.93□□□□□ -2.1
MMP2P08253 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
MMP2P08253 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
MMP2P08253 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
MMP2P08253 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP2P08253 Y_RNA.47-201ENST00000362697 108 ntBASIC1.92□□□□□ -2.1
MMP2P08253 RNU6-238P-201ENST00000363313 106 ntBASIC1.92□□□□□ -2.1
MMP2P08253 Y_RNA.149-201ENST00000363558 117 ntBASIC1.92□□□□□ -2.1
MMP2P08253 Y_RNA.222-201ENST00000364264 102 ntBASIC1.92□□□□□ -2.1
MMP2P08253 Y_RNA.286-201ENST00000364813 102 ntBASIC1.92□□□□□ -2.1
MMP2P08253 RNU6-407P-201ENST00000365280 104 ntBASIC1.92□□□□□ -2.1
MMP2P08253 RNU6-102P-201ENST00000384485 104 ntBASIC1.92□□□□□ -2.1
MMP2P08253 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
MMP2P08253 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
MMP2P08253 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
MMP2P08253 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP2P08253 AL731563.1-201ENST00000442202 214 ntBASIC1.92□□□□□ -2.1
MMP2P08253 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP2P08253 DYNLT3P2-201ENST00000442517 295 ntBASIC1.92□□□□□ -2.1
MMP2P08253 SUMO1P2-201ENST00000452524 304 ntBASIC1.92□□□□□ -2.1
MMP2P08253 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
MMP2P08253 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
MMP2P08253 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
MMP2P08253 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP2P08253 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
MMP2P08253 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP2P08253 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
MMP2P08253 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
MMP2P08253 AC006435.5-201ENST00000624486 112 ntBASIC1.92□□□□□ -2.1
MMP2P08253 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
MMP2P08253 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.92□□□□□ -2.1
MMP2P08253 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
MMP2P08253 SNORA27.1-201ENST00000362604 124 ntBASIC1.91□□□□□ -2.1
MMP2P08253 SNORA33-201ENST00000363664 130 ntBASIC1.91□□□□□ -2.1
MMP2P08253 RNU6-271P-201ENST00000363858 105 ntBASIC1.91□□□□□ -2.1
MMP2P08253 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
MMP2P08253 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
MMP2P08253 RNU6-1186P-201ENST00000410429 97 ntBASIC1.91□□□□□ -2.1
MMP2P08253 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP2P08253 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
MMP2P08253 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
MMP2P08253 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.91□□□□□ -2.1
MMP2P08253 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.91□□□□□ -2.1
MMP2P08253 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP2P08253 AP003733.2-201ENST00000529409 171 ntBASIC1.91□□□□□ -2.1
MMP2P08253 MIR4438-201ENST00000585271 93 ntBASIC1.91□□□□□ -2.1
MMP2P08253 MIR7843-201ENST00000622274 79 ntBASIC1.91□□□□□ -2.1
MMP2P08253 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
MMP2P08253 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
MMP2P08253 SNORD81.1-201ENST00000363064 77 ntBASIC1.9□□□□□ -2.11
MMP2P08253 Y_RNA.124-201ENST00000363339 93 ntBASIC1.9□□□□□ -2.11
MMP2P08253 Y_RNA.144-201ENST00000363521 113 ntBASIC1.9□□□□□ -2.11
MMP2P08253 MIR215-201ENST00000384858 110 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms